Osmerus eperlanus (European smelt): 134039795
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Entry
134039795 CDS
T10927
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134039795 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134039795 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134039795 (ncor1)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134039795 (ncor1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
134039795 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
LOB
Motif
Other DBs
NCBI-GeneID:
134039795
NCBI-ProteinID:
XP_062341863
LinkDB
All DBs
Position
19:7338025..7387833
Genome browser
AA seq
2456 aa
AA seq
DB search
MSSSSGYPQSQGSFSSEQSRYPPHSVQYTFSPSRHQQEFTVQDYRAHLQDTQQGRRRPSL
LSEFHPGTERPPERRHGYDQQFQSSAGQPEHEAMETKRPRMETVSEAHFARATQGSGGIS
LPHSHTLQDSLRSNMEAKKESQYSVKADSSSPGGPHHLGEEQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPMEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKETRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVKFINMNGLMDDP
MKVYKARQFMNVWSEHEREIFKEKFVQHPKNFGLIASYLERKCVSDCVLFYYLTKKNQNY
KTLVRRNFGRRRGRNQQITRPSQEDKADDKTEEEKLEKSEKKEDEEKKDEEEKDEKEESR
DRDRDKDKCDGAEDDDGKEQSTPRGRKTANSQGRRKGRITTRSMANEAASVVPEETPSSA
SEPALPEPPKQEPSQKTLREPAKQAPMSLENNRSKRAIAAEETSRWTEEEMEVAKKGLVE
HGRNWGGPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDSRRARGDRDVSQSES
VASTASADDDEDNQEDSEGGDHSSDTESAPSPSQADPSKGGDPQRGEGGGASSEGSQRSE
QDKGQAADGKGPPEAPYGELRVKLEKSPEGGPEEERARAAYEGQVHPKSEPQDVDMSAPV
QVKVEPEAKEKADKAGGAADEHGDRQGPSDNDSSATCSADEDGDAEPERRGMFSMDKPSL
LSPPGSVVVSSAKQAHLSMHQLQQRAADIPAMVPGPFSPGGVPMVTPLSGLAMFQHQIKA
AHESAHQEDRQRQETRFHTRSPTVLDREGKPFPYMSYDMKLALEQEAQAGRPASPYRLSP
RELSKTSPQPDPNTANASRYSVPPVLHPAPNQVVQGLPEGVRVTFSRHSRPPNIPSPPPL
IPTSKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSSVGSISLGLPRQQEPSKPVS
YIKQEECSPRSSQPEGLLSRAQYEGVVRGGPMSSMQDGGISRGNPAKVGAEGLQFRGSIT
QGTPALPQPSLASDLLKGTITKLATEELGSPDKAREQLAKGHVIYEGKSGHILSYDAIKN
PREATRSPRTHELKRTYDMMEPLARGHPGREGVPFEGLISRALPRDSPHGDSKERPMMTG
SIMQGTPRTSAEAYEESMKYGKQIKRESPPIRSFEGGIVKGKPYEGGGNTIKEMGRSIHE
IPRQDQSGQDSRKTPDMADSRRVAMDGAMSQGHPLGQPAIKHNVKSLITSPGKMGHGLPQ
LDAMERAKYEEGKAASERVRHTSVVNSATSVLRSTHQEAAKSQLSPGMYEDASARRTPVN
YSTGPMSRGSPMLGRAQEGGMSSGKPSPHDRKTPTHRDSMPAKSPVSQGEPMPSHSPFDP
HHRAGVPGEVYRAHLPPHLDPATLAFHRVIDPAAAAYMFPRQGSPTGYHNTYQLYTMENT
RQTILNDYITSQQMQVIPRADVPRGLSPREQQQIAIPYPPGARGIIDLAQMPPTILLPHP
GGTGTPTLDRITYMPGAQPPFPPRAFNPASISPGHQAHLAATAATIEREREREREREREH
REREKERDKEREREHREREHREREREHRERERERAVAAASDYMRGGVEQPGRPGSRGYLR
SPSPSMRTPEGVVQQRPSIFQGTNSKSVITSLMPPAAQASQPGSRYSTAADALAALVDAA
ASAPQMDVAKAKEGKHKDDTSSSSAAAARRAVSEQQDAERRSMQSPYGALAMPGGKQHPA
YGEQAGAGSKDKTPPSKSRIEEELRTRGKTTITAANFIDVIITRQIASDKDARERGSQSS
DSSSSLSSNRYEAAGGAAIEVISPASSPAQPQAQPQQDKQDDRQPQPPAGMRVFDMSRYR
PAGEPPQPSSQAPPLGQADSSYSQVPKTHRVMTLADHISHIITQDFARNQDPPPPSSTTT
SSSSSATTTFQSAVSSSGLGRAKPPSRYSPENQAPHHQRPPSRLSPENAPDKPKARPGKS
PDRGGRQMDGYEPISPPQSYPSMDKPEASAPQPQRRENDNPEMRGDSRSPGSGSYLPSFF
TKLESTSPMVKSKKQEIIRKFRNSSGAGDSDIGAAQPGTEIFNLPAVTSSSGINPRNHSF
SDPASNLGLEDIIRKALMGNLEERPEEPQGGAAPPSSNTPGGEARQEANPSPSMGKQKLQ
GKANSRKSKSPNPGQAYAGGERPSSVSSVHSEGDYHRQAPAWAWEDRPSSTGSMQFPYNP
LTMRMLNSTPPTSMASPSIQAQQQSVPGGAPAAQQLVWEREPLLSEQYETLSDSDD
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccccagagccaggggagcttcagcagcgagcagagccgt
tacccaccgcactctgtccagtacaccttcagcccctcacgccatcagcaggagttcacc
gtccaagactaccgggctcacctccaggatacccagcagggcaggaggagaccctccctg
ctctctgagttccaccctgggaccgagaggcctccggagcgacgtcatggctacgaccag
cagttccagagctccgccggccagccagaacacgaggccatggagaccaaacgtccacgc
atggagacggtctccgaggcccactttgcccgcgccacgcagggctccgggggaatctcc
cttccacactcgcacactctccaggacagcctgaggtccaacatggaggccaagaaggag
agccagtacagcgtgaaggccgactcttcctccccgggagggccacatcacctgggggag
gagcaggacgcttcaccctccaagctgtccaaggaggagctcatccagagcatggaccga
gtcgacagagagatcgccaaagtggagcagcagatcttcaagctgaagaagaagcagcaa
caactggaggaggaagctgcgaagcccatggagccagagaagcccgtgaccccgcccccg
gtggagcacaagcaccgcagcattgtccagatcatctacgacgagaatcggaaaaaggca
gaagaggcccataaggtcttagaaggtctcggtcctaaagttgaactgcctctttacaac
cagccatcagacacaaaagtataccacgacaacatcaagactaatcaagtgatgaggaag
aagctcattctcttcttcaagaggaggaaccacgctcgtaaacaaagggagcagaagatc
tgccagcgctacgaccagctgatggaggcgtgggagaagaaggtggagcgcatggagaac
aacccccgccgcaaggccaaggagacgcgcacgcgcgagtactacgagaggcagttcccc
gagatccgcaagcagcgggagcagcaggagcgcttccagagggtcggccagagaggaacc
ggcctttccgcaaccatcgcaagaagcgagcacgagatttcggaaataatcgacggcctt
tccgaacaagagaacaacgagaagcagatgaggcagctgtccgtcatcccgcccatgatg
tacgacacggagcagcggcgggtcaagttcatcaacatgaacggcctgatggacgacccc
atgaaggtgtacaaggcccggcagttcatgaacgtgtggagcgagcacgagagggagatc
ttcaaggagaagtttgtccaacaccccaaaaactttggcctcatcgcttcctatctggag
agaaagtgcgtttccgactgcgtcctgttctactatctcaccaagaagaaccagaattac
aagaccctggtgagacgcaactttggaagacggagaggcaggaaccagcagatcacacgt
ccctcgcaagaagacaaggccgacgacaagactgaggaggagaagttggagaagtccgag
aagaaggaggacgaagagaagaaggacgaggaggagaaagatgaaaaggaggaatccagg
gacagagacagagacaaagacaagtgcgacggcgcggaggacgacgacggcaaggagcag
agcacgccgcgcggcaggaagacggccaacagccagggccgacgcaagggccgcatcacc
acgcgctccatggccaacgaggcggcgtccgtggtccccgaggagacgccctcctcagcc
tcggagccggccctgcccgagccccccaagcaggagcccagccagaagaccctgagggag
cccgccaagcaggcccccatgagcctggagaataacagaagtaagagagccatagctgcg
gaggagacttctcgctggaccgaggaggagatggaagtcgcgaagaaagggctggtggag
catgggaggaactggggggggccggccattgccaagatggtgggcaccaagagcgaggct
cagtgcaagaacttctacttcaactacaagaggcgccacaacctggacaacctgctccag
caacacaagcaggactcccggagagctcgcggcgaccgggacgtgtcccagagcgagagc
gtcgcctccacggcgtcagctgacgacgacgaggacaaccaggaggacagcgaaggcgga
gaccacagctccgacacggagagcgccccctctccgtcccaggccgacccctccaagggc
ggggacccccagcggggcgagggcggcggggcctcctccgagggctcccagcgctcggag
caggacaagggccaggcggcggacgggaagggccccccggaggccccttacggcgagctg
cgggtcaagctggagaagagccccgagggcgggccggaggaggagagggcgcgggcggcc
tacgagggccaggtgcaccccaagagcgagccccaggacgtggacatgtcggccccggtg
caggtgaaggtggagcccgaggccaaggagaaggccgacaaggcgggcggggcggccgac
gagcacggcgaccggcagggcccgtcggacaacgactcgagcgccacgtgcagcgccgac
gaggacggcgacgctgagcccgagaggcgtgggatgttctctatggacaagccttctctc
ctcagccccccaggctcagtggtggtgtcctcggccaagcaggcccacctcagcatgcac
cagctgcagcagcgcgccgctgacatcccagccatggtgccaggccccttcagcccgggt
ggcgttcccatggtgacgcccctcagcgggctcgccatgttccagcaccagatcaaggca
gctcacgagtcggctcaccaggaagaccggcagaggcaggagactcgcttccacacacgc
agccccaccgtgctggaccgggaagggaagcccttcccctacatgtcctatgacatgaag
ctggctctggagcaggaggcccaagccggccggccagcctccccctacaggctctccccc
agggagctgagcaagacctccccccagcccgaccccaacaccgccaacgcctcgcgctac
agtgtgcctccagtgctccacccggcccctaaccaggtggtgcagggcctgccggagggc
gtcagggtgaccttctccagacacagccggccgcccaacattccgtctcctcctcccctc
attcccacctccaagccgacagacaagccatccttcatccaggggggctcgatatcccag
ggcactcctggaacctacctgccctcccacgccgtgtacggcccggagggcaccaagagc
tcggtggggtccatctctctggggctccccaggcagcaggagccctccaagcccgtctcc
tacatcaagcaggaggagtgctccccgcggagctcccagcccgagggcttgctctccagg
gcgcagtacgagggggtcgtcagaggaggccccatgagctccatgcaggacgggggcatc
tcccggggcaaccctgccaaagtgggcgctgaggggctgcagttcagaggatcgatcact
cagggcacgcccgccctgccccagcccagcctggcgtccgacctcctgaagggcaccatc
accaagctggccacggaggagctgggcagcccggacaaggctagggagcagctggccaag
ggccacgtcatctacgagggcaagagcggacacatcctctcctacgacgccattaagaac
cccagggaggctacgcgcagccccaggacccacgagctcaaacgcacctacgacatgatg
gagccgctcgccaggggccacccgggcagagagggagtcccatttgaagggttgataagc
cgagcgctgcccagagacagtccccacggcgactccaaggagaggccgatgatgaccggg
tccatcatgcaagggaccccgaggacctcagccgaggcctacgaggagagcatgaagtac
ggcaagcagatcaagcgggagagcccgcccatccgctccttcgaggggggcatcgtcaag
ggcaagccctacgagggcggcgggaacaccatcaaggagatgggccgctccatccacgag
atcccccggcaggaccagtccggccaggacagccgcaagacgcccgacatggccgacagc
cgccgcgtcgccatggacggagccatgtcgcagggtcaccccctgggccagccggccatc
aagcacaacgtcaagtccctgatcaccagccccggcaagatgggccacggcctgccccag
ctggacgccatggagcgggccaagtacgaggagggcaaggcggcgtcggagcgcgtgcgc
cacacctccgtggtcaactcggccacctcggtgctgcgctccacccaccaggaggcggcc
aagtcgcagctcagcccgggcatgtacgaggacgccagcgcccgccgcacccccgtcaac
tacagcacgggccccatgtcccgggggtcgcccatgctgggccgcgcgcaggagggaggc
atgagctccggaaaaccgtctccccacgacaggaagacgcccactcaccgagacagcatg
ccggccaagtcccccgtgtcccagggggagcccatgccctcccacagccccttcgacccc
caccaccgggccggggtccccggggaggtgtaccgggcccacctgcccccgcacctggac
ccggccaccctggccttccacagggtcatcgacccagcggcagcagcctacatgttcccc
aggcaggggtcgccgaccggctaccacaacacctaccagctgtacaccatggagaacacg
cggcagaccatcctcaacgactacatcacctcccagcagatgcaggtcatcccgcgggcc
gacgtgccccggggcctgtcgccgcgggaacagcagcagatcgccatcccttaccctccc
ggggccagagggatcattgatctagcccagatgcctccaactatcctgttgcctcaccct
ggggggacaggtacccccactctggaccgcatcacctacatgcccggagctcagccccct
ttccctcctagggctttcaacccagcctccatatctccaggtcaccaagcccacctggcg
gccacggcggccaccattgagagggagcgcgagcgggagagggagcgcgagcgggaacac
cgggagcgggagaaggagcgcgacaaggagcgggagcgggagcaccgggagcgcgagcac
agggagagggagcgcgagcacagggagagggagcgcgagcgggccgtcgccgccgccagc
gactacatgcgaggaggtgtggagcagccaggacgccctggtagccgtggttacctgcgg
tccccctccccctccatgaggacgccggaaggagtggttcagcagcggcccagcatcttc
cagggaaccaacagcaagagtgtcatcacttccctcatgcccccggcagcgcaggcgtcc
cagcccggctcccgctacagcacggcggccgacgccctggccgcgctggtggacgccgcc
gcctcggcgccccagatggacgtggccaaggccaaggagggcaagcacaaggacgacacg
tcctcctcctcggccgccgccgcccgccgcgccgtcagcgagcagcaggacgccgagcgg
cgctccatgcagtctccctacggcgccctcgccatgcccgggggcaagcagcacccggcc
tacggcgagcaggccggggcgggcagcaaggacaagacgccgccctccaagtcgcgcatc
gaggaggagctgcgcacgcgcggcaagaccaccatcaccgccgccaacttcatcgacgtc
atcatcacgcggcagatcgcctcggacaaggacgcgcgggagcgcggctcgcagagctcc
gactcgtccagcagcctgtcgtctaaccgctacgaggcggccggcggagcagccatcgag
gtgatcagccctgccagctccccggcacagccccaggcacagccccagcaggacaagcag
gatgacaggcagccacagcccccagctggcatgcgcgtcttcgacatgagccgctaccgc
ccagcaggggagcccccccagcccagctcccaggccccccccttgggccaggccgactcg
tcgtactcccaggtccccaagacccaccgggtcatgacgctggccgaccacatctctcac
atcatcacccaggacttcgcccggaaccaggacccgccccctccttcctccaccaccacc
tcctcctcctcctccgcgaccaccacattccagagtgcggtctccagctctggcctgggc
cgcgccaagccccccagccgctacagcccggagaaccaggccccccaccaccagaggccc
cccagcaggctgtcccccgagaacgcccctgacaagcccaaggccaggcccggtaagtcc
cccgaccggggaggccgacagatggacggctacgagcccatctcccctcctcagagctac
ccgagcatggacaagcccgaggccagcgccccgcagccccagagacgggagaacgacaac
ccggagatgaggggcgactcgcggtccccggggagcggaagctacctgccctcgttcttc
accaagctggagagcacctctcccatggtgaagtccaagaagcaggagatcatccgcaag
ttccgcaactcctccggcgcgggcgactccgacatcggggccgcccagccaggcacagag
atcttcaatctgccagctgtgaccagctcaagcggcatcaaccccaggaaccactcgttc
agcgacccggccagtaacctgggcctggaggacatcatccgcaaggccctgatgggcaac
ctggaggagaggccggaggagccgcagggaggggccgctccgcccagctccaacaccccc
ggcggggaggcccgccaggaggccaacccttcacccagcatgggcaagcaaaagctgcag
ggcaaagccaacagccgcaagtccaagtcgcccaacccgggccaggcgtacgccggaggg
gagcgcccctcgtccgtgtcgtccgtccactccgagggagactaccaccggcaggccccg
gcctgggcctgggaagacaggccctcgtccacaggttccatgcagttcccctacaacccc
ctgaccatgcgcatgctgaacagcacaccgcccacctccatggcctccccctccatccag
gcccagcagcagtctgtaccggggggcgccccggccgcccagcagctggtgtgggagcgg
gagcccctgctgtcggagcagtacgagaccctgtcggacagcgacgactga
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integrated database retrieval system