Osmerus eperlanus (European smelt): 134039868
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Entry
134039868 CDS
T10927
Symbol
srrt
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134039868 (srrt)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
134039868 (srrt)
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
134039868
NCBI-ProteinID:
XP_062341990
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Position
19:complement(13442652..13450442)
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AA seq
892 aa
AA seq
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MADSDDEYDRRRRDKFRRERSDYDRSREREDRRRDEWNDRRPSAREWERGRERRSRGEYR
DYERGRRERFSPPRHDMSPQQKRMRRDWDDHGGEPYHGGYDLGYGVSGGPSYAPPQPWGP
PDLHLMQHHHSIPIQARLGNIHDLDLCPPPPLMKTFKEFLLSLDDSVDEGEAVKRYNEYK
MDFRRQQMQDFFLTHKDEEWFRSKYHPDEAGRRRAETHSALQNRLNVYMFLMENGWFDNV
SLDIERGPAIVKVLDAAVIKMEGGTDHDLRVLELPSEEEEERGPEPPKREEPRGAAGDSK
PPEEKEDKEKGEGEAACAERAGAAAVDAPGGEEKREGKDGMVQTPAAKKQGKKRKRKHSG
DSEDEASASESDSDSDSNSRSSDKPAEREEGEEKEDEEEEEEGETRGNEGKEEKGKGREP
GREVEKEDKKTKEDQPPRPRPLHRTCSLFLRSIAPSISKAEIVSLCRRYPGFLRVCLSDP
HPERRFYRRCWVTFDRSVNIKEVCWNLQNIRLRDCELAPGVNRDLARRIRNVNGITQHKQ
VLRNDIKLSAKLIHALDERGQLWSHRPQGDSPGLELPGQNPIMKNITDYLIEEVSAEEEE
LLGSVGGADPEEGTREGNPAEITVERDDNLVTVLDRLLFYLRVVHSIDYYNSCEYPSEDE
MPNRCGLMHVRGPIPPNRVTHGEVSQWQKTFEEKLLPLFSVKETLSEDEAGKMGRKDPEQ
EVEKFVLANTQELGKDKWLCPLSGKKFKGPEFVRKHILNKHGDKIEEVKKEVEFFNNFLL
DAKRPTLPEIKSNMPPGPGQGLLSPGLPFPPQGHQGLMGFGQPRPPIMGYGGGPPYPPNP
YGGGGGRGNYDNFRGQGGGYQGKPRNNRMSRGDPRNIIEYRDLDAPDDVEFF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcgatgatgaatatgatcgcaggagaagggacaagttccgccgtgagagg
agtgactatgaccgctccagagagagagaggacaggcggagagatgagtggaacgacagg
cgcccctcggccagggagtgggagcgcggccgggagcgtcgaagccggggagagtaccgg
gactacgagagggggcgcagggagcgcttctccccccctcgacacgacatgagcccccag
cagaaacgcatgaggagagactgggacgaccatggaggggagccttaccacggaggctat
gacctgggctacggggttagtggagggcccagctacgcccccccccagccctggggcccc
ccagatctccacctgatgcagcaccaccacagcatccccatccaggccaggctgggcaac
atccacgacctggacctgtgtcctccgccgccgctgatgaagacgtttaaggagttcctg
ctgtctctggatgactctgttgacgagggcgaggccgtgaagagatacaatgagtacaag
atggacttcagacggcagcaaatgcaggacttcttcctcactcacaaagatgaggagtgg
ttcaggtccaagtaccacccagacgaggcggggcggcggcgggcggagacccacagcgcc
ctgcagaacaggctgaacgtgtacatgttcctcatggagaacggctggttcgacaacgtc
tccctggacatcgagcgcggtccggccatcgtcaaggtcctagacgcagcggtgatcaag
atggagggagggacggatcacgacctgagggtcctggagcttccctcggaggaggaggag
gagcgaggccctgagccgcccaagagggaggagccccggggtgcggccggggacagcaaa
cctccggaggagaaggaggacaaggagaagggcgagggcgaggccgcctgtgccgagagg
gcaggagcggccgcagtagacgccccggggggagaggagaagagggaggggaaggacggc
atggtgcagacacccgcagccaagaagcagggaaagaagaggaagaggaagcacagcggc
gacagcgaggacgaggccagcgcctccgagagcgactccgactctgactccaactctcgc
tcgtccgacaaaccggcagagagagaggagggggaggaaaaggaggatgaggaggaagag
gaagagggggaaactcgtggcaatgagggcaaagaggagaagggcaaggggagggagccg
gggagggaggtggagaaggaggacaagaagacgaaggaggaccagccccccagacccagg
cctctccacaggacctgctctctgttcctcaggagcatcgctccctccatctccaaggcg
gagatcgtctctctgtgcaggaggtatcctgggttcctgcgcgtgtgtctgtcagaccca
cacccggaacgcaggttctacaggcgttgctgggtgacgttcgatcgcagcgtgaacatc
aaggaggtctgctggaacctgcagaacatcagactgcgggactgtgagctggcccccggg
gtgaacagggacctggctcgcaggatccgcaacgtgaacggcatcacgcagcacaagcag
gtgctgcgcaacgacatcaagctgtcggccaagctgatccacgctctggacgagcggggc
cagctgtggagccaccgcccccagggagactccccgggactggagctgccaggccagaac
cccatcatgaagaacatcacagactacctgatagaggaggtgagcgcggaggaggaggag
ctactgggcagcgtgggcggggccgacccagaggagggcaccagggagggcaaccctgca
gagatcaccgtggagagagacgacaacctggtcacggtgctggaccggctactgttctac
ctgcgtgtggtacattccatcgactactacaactcgtgcgagtacccgagcgaggatgag
atgcccaaccgctgtggcctgatgcacgtacgggggcccatccctcccaacagggtgacc
cacggagaggtgtcccagtggcagaagacgtttgaggagaagctgcttcctctgttcagt
gtgaaggagactctgtctgaggacgaggctgggaagatggggcggaaggatccggaacag
gaggtggagaagtttgtgttggccaacacccaggagctgggcaaggataagtggctctgc
cctctcagcgggaagaagtttaagggaccagaatttgtgcgtaagcacatcctgaataaa
cacggggacaagattgaggaggtgaagaaggaggtggagttctttaacaacttccttctg
gatgccaagcgcccgaccctccctgagatcaagtccaacatgcctcctggaccaggacaa
gggctgctctcccctggcctgcccttccctccccagggacaccagggcctcatggggttt
ggccagcctcggcctcccatcatgggctacggaggtggacccccatacccgcccaacccc
tacggaggggggggcggccggggtaactatgacaacttccgtgggcagggggggggctac
caggggaagccccgtaacaacaggatgagcagaggagatcctcgcaacatcattgagtat
cgtgacctggatgctccggatgatgtggaattcttctag
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