Osmerus eperlanus (European smelt): 134039899
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Entry
134039899 CDS
T10927
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oep04990
]
134039899
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
134039899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
CSLinker
Motif
Other DBs
NCBI-GeneID:
134039899
NCBI-ProteinID:
XP_062342036
LinkDB
All DBs
Position
19:6267636..6274585
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AA seq
969 aa
AA seq
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MPQGSVSPLPVLLALLGYAMAGLHLWPSLHVALSNASVFIDYSTERNDTVECNTTLSLVD
TETNTTVLTRNLPSNQSEGRVEFNCSCFLYAGKFRFRLEQTRYAIVHNTNGSDMGSTEVA
TLWWSPELKVEWPTIHIAVERSSNQSGSFQVGISTNEHFQSCSSGFGSALYLEVSYLEFN
QIGRNSIDKVRARTRLPIKALHSQTMELACAFPFTERDFVTVALRSTHTAQDVKTSGPLY
LSRIFSYKLLVNNPQAYRTGCEGTVSVRLITPPCAHINGKVRLYRDGPPGGRGASGSPGG
AGAGLDGPDDPSSPLLAFKWLTHGENETEFNCSVFEPGRNKYCFRFVLNFSRSPSPAQTC
LVVHRSAETWGLWQAWSMCSVSCGEGVRERVRECLLPSGGGGLQCTGMMKEQSLCSLDDC
AVLAPPTPSNPPTPAGVSLLGGNLVVMAGISLCLAVILATVLVTVWRKLCRAPPCSSVRR
ASMHSPGGRKLSDEASICGHSLQRPSLSESQGQGALGLGLAQAGSSPLGGQALPQPVVLP
LAQDPDRLSPSGQKVLPPIFGYRLAQHQLKEMKKKGLKEATQVYHVSQSPVHDTLLETTA
TPTAASTPTPAGLTSPGLTPSPVALDLQEEANLSGFRIAVPFPEAWAPPRSCHTLPDRLS
PRVELVLGAPAAGYASGGSAKRRDRTADWVEMVERSSLGGLRGGGAGGAPYQRNPNFRRT
LSFHDTKPQPPPLASSRPYRERSMSQVAPRTVPEGSCKTRGAWENQAYPPYHSYPIPEQG
PADWARSPARAPGDNRRRPWLETSGPTLTSDTKHTGTNTSAATSMTELAGKAEVRGGMGW
LRGGGRGGGGGTSGIGGPGTRGDGAHLGVERAEQKWSRRGPSPIQRNILARKLKEAQSCS
PASGPRGRQRSSTFSASASEQRKSRCRSLPLSGDYSSSGSPYGLSEEEQRMLDLDLAYLG
EVEYSPGHT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccacagggctccgtctcgccactgccagtcctgttggcgctcctgggatacgcaatg
gctggactccacctttggccctcactccacgtagcccttagtaacgccagcgtgttcatc
gactacagcacggaacggaacgacacggtagagtgcaacaccaccctgtctctggtcgac
acggaaaccaacaccactgtcctgaccaggaacctcccctccaaccaatcagagggcaga
gtggagttcaactgctcctgcttcctgtatgccggaaaattcagattccgtctggaacag
accagatatgctatagtccataataccaatgggagtgacatgggcagtacagaagtggcc
accctgtggtggagtccagaactgaaggtggagtggcccaccatccacattgccgtggag
aggtccagtaaccaatcaggttcctttcaggtaggtatctccaccaacgagcacttccag
tcgtgctccagcggattcggctccgccctctacctggaagtgagctacctggagttcaac
cagatcggccgcaacagcatcgacaaggtccgcgcccgcacgcgactccccatcaaagcc
ttgcattcccagaccatggagctggcctgcgccttccccttcacagagagggactttgtc
accgtggccctgcgctccacccacaccgcccaggacgtgaagacctcggggcctctctac
ctctcgcggatcttctcctacaagctgctggtgaacaacccccaagcttaccggaccggc
tgcgaggggaccgtttccgtgcgcctgatcacgccgccctgcgcccacatcaacgggaag
gtgcgcctgtaccgggacgggccgccgggggggaggggggcctccggtagccccgggggg
gcgggggcggggctggacgggccggacgacccctcctcccccctgctggcgttcaagtgg
ttgacgcacggggagaacgagacggagttcaactgctcggtgttcgagccgggccggaac
aagtactgcttccgcttcgtgctgaatttcagccgctcgcccagcccggcgcagacctgt
ctggtggtccacaggagtgcagagacctggggtctgtggcaggcgtggagcatgtgcagt
gtgagctgtggggaaggagtgagggagcgggtgcgtgagtgtctgttgccctctgggggc
ggcgggctgcagtgcaccggcatgatgaaggagcagtcgctctgctctctggatgactgt
gcagtgctggcccctcccaccccctccaacccccccaccccggcaggggtgagtctcctg
ggggggaacctggtggtgatggccggcatctccctgtgcctggctgtcatcctggccacc
gtgctggtgaccgtgtggaggaagctctgcagggcccctccgtgcagctccgtacgccgc
gcctccatgcactcccccgggggccgcaagctctccgacgaggcctccatctgcgggcac
agcctccagagacccagcctgtcggagagccagggccagggggcgctggggttggggctt
gcccaggcagggagttcgccgctgggcggccaggctctaccgcagcccgtggttctccct
ctggcccaggaccctgacaggctgtctccttcagggcaaaaggtgctgccacctatcttt
ggctatcgcctggcccagcatcagctgaaggagatgaagaagaaaggcctgaaggaggcc
acccaggtctaccacgtctcccagagccccgtccacgacacgctactggagaccaccgca
acacccaccgccgcctccaccccaaccccagcagggctcacctcccctgggctcactccc
agccccgtggccctggacctccaggaggaggcgaacctcagcggcttccgcatcgcagtc
ccctttcccgaggcgtgggccccaccacggagctgccacaccttaccggacaggctgagc
cccagggtggagctcgtcctgggggcccccgcggcgggatacgccagcggggggagcgcg
aagaggcgcgaccgcacagccgactgggtggagatggtggagaggagcagcttggggggg
ctgagaggagggggagcgggaggggccccctatcagaggaaccccaacttccggcggacc
ctaagttttcacgacaccaagccccagccccctcccctggcctcctctcggccttacaga
gaaaggagcatgtctcaggtggctcccagaaccgtcccagagggcagctgcaaaaccagg
ggagcctgggagaaccaggcctaccctccctaccactcctaccccatcccagagcagggg
cccgccgactgggcgaggagcccagccagagcccctggggacaaccggagaaggccgtgg
ttggagacatcgggtcccactcttaccagcgacaccaagcacacggggaccaacacttca
gcagccacctccatgaccgagctggccggtaaagcagaggtcaggggagggatgggttgg
ctgaggggcggtggaagaggaggaggagggggaacctctgggatcggtgggccggggaca
cgtggcgacggagcccacctgggagtggagcgggcggagcagaagtggagccgccgcggc
ccgtcccccatccagaggaacatcctggcccgcaagctgaaggaggcccagtcctgctcg
ccggcctccggcccccgggggcgccagcgcagctccaccttcagcgcgtcggcctcggag
cagaggaagagccgctgccgctcgctgcccctgtcgggggactacagcagcagtggctcc
ccctacgggctgagtgaggaggagcagaggatgctggacctggacctggcctacctgggg
gaagtggagtactcacctggacacacctga
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