Osmerus eperlanus (European smelt): 134039920
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Entry
134039920 CDS
T10927
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134039920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134039920
03012 Translation factors [BR:
oep03012
]
134039920
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134039920
Translation factors [BR:
oep03012
]
Eukaryotic type
Release factors
134039920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
134039920
NCBI-ProteinID:
XP_062342098
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Position
19:complement(12857846..12862208)
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AA seq
444 aa
AA seq
DB search
MADDTSAAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTA
SNIKSRVNRLSVLGAITSVQQRLKLYNKVPSNGLVVYCGTIVTEEGKEKKVNIDFEPFKP
INTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKK
HGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQS
DMFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTG
KYCFGVEDTLKALEMGAVEILIVYENLDTMRYILRCHGAEGLAMENDEKTLYLTPEQEKD
KSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGIL
RYRVDFQGMDYQGEDDELFDLDDY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacaccagcgcagcagcggacaggaacgtggagatatggaagataaagaag
ttgatcaaaagtctggaagcagccagagggaatggcacgagtatgatttcccttatcatc
ccgccgaaagaccagatctccagagtggctaagatgctggccgatgagtttggcacagcc
tccaacatcaagagcagagtcaaccgcctgtcagttctgggtgccatcacgtctgtccaa
cagagacttaagctctataacaaagtgccttccaatggcttagttgtctactgcggaact
atagtgaccgaggagggcaaagagaagaaagtgaatattgactttgagcctttcaaacct
atcaacacctcactttatctttgcgacaacaaattccatacagaggctctcaccgctttg
ctatcagacgatagcaagtttggtttcattgtaattgacggaagtggcgcgctcttcggg
accctacagggcaacaccagagaagtgctccacaagttcaccgtggacctaccaaaaaag
cacggcagaggaggccagtccgccctgcgttttgctcgcctgcgcatggagaagagacac
aactacgtgcgtaaggtggcggagactgcagtccagctctttgtctctaacgacaaagtc
aacgtagccggcatggtcctggccggttcggctgacttcaaaacagagctcagccagtcg
gacatgtttgacccgaggttacaagcaaaggtgttgaagctcgtggatatctcatacgga
ggagagaacggcttcaaccaggccatcgagttgtcagctgaagtgctgtccaatgtgaaa
ttcattcaggagaagaaactaataggacgatactttgacgagatcagccaggacacaggc
aagtactgctttggggtagaagacactctaaaagccctggagatgggagctgttgagatt
ctcattgtctacgagaacctggacacgatgagatacatccttcgctgccatggtgcagag
ggattggcaatggaaaatgatgagaagactttgtatttaacgccggaacaagagaaagac
aaatctcacttcacagacaaagagacaggacaagaacatgagctgattgagagcatgcca
ttgctcgagtggtttgccaacaactataagaagtttggagctactcttgagattgtcaca
gacaagagccaggagggatcccagtttgtaaaaggttttggtggaattggagggatcttg
cggtacagggtcgattttcaaggcatggactatcaaggagaggatgatgaattgtttgat
ttggatgactactag
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