Osmerus eperlanus (European smelt): 134040013
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Entry
134040013 CDS
T10927
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oep03016
]
134040013 (tsen54)
Transfer RNA biogenesis [BR:
oep03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
134040013 (tsen54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
CDC45
Motif
Other DBs
NCBI-GeneID:
134040013
NCBI-ProteinID:
XP_062342221
LinkDB
All DBs
Position
2:1743498..1758062
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AA seq
571 aa
AA seq
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MADQNRSDAKFEFCSEILSPSELFAARSRSHKIPVRGQKEFLPSDSGRQRERLQQSLDEH
WSLVSEERVERLGNLVKAVWIPSERVVELQSPAGKFWQTMGFSAQGKQCLHPEEALYLME
CGNLQVFHRELPLSIQEAYERFLSSTTVSLQQYQVFGHLKRLGYVVNRFDISSVASQYER
QLNLPVSRDRGGRHVKRKRSPSPPPRITEAQQGSASGSASEEPGSASEERRERDDGERSE
RRDRVEREDRREKERNDRMEERGVEEETERKKEEGKPDSPSRHTASPPSDVTMATSPGTP
GLTEAGMGRNWWAAEDPDQAGTHSHPAPNLPPPQPSSSAPPRWDSISFPDLGSRRDLPSS
LPSPEPSLLPGALAVGPCEVTPWLLRLSLRQVHMSRGERERERERDRYRRDVNEDREVRC
CRNWAEYRQLLAQRRGQSHRDRPAHLWEGKVTPLHDPRHPTSCGELLDKISVIKPYRLTD
GTSREQGSGGWRLCFDVYQPDTVAEFRKSSPGKPYSRMCVCSFAGPVPDLRVVEQLMEQS
GGVPVTFAVVDHGDISFYCFKPFLLTTDTVH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaacagaagcgatgcgaaatttgaattctgcagcgaaatattgagcccg
tcggagctgttcgctgcccggtccagaagtcacaagatcccggtgagaggacagaaggag
tttctaccgagcgactccgggagacagcgagagcgactgcagcagagtctggatgagcac
tggagcctggtgtcagaggagagagtggaaaggctaggcaacctggtgaaggctgtatgg
atccccagtgagagggttgtggagctgcagtcaccagctgggaagttctggcagaccatg
ggcttctctgctcaggggaagcagtgtctccaccccgaggaagccctctacctcatggag
tgtggcaacctgcaggtgttccacagagagctgcctctgtcgatccaggaggcctacgag
aggttcctgtcttccacgactgtgagccttcagcagtaccaggtgttcggacatctgaag
agactgggctacgtggtcaacaggtttgacatcagttcggtggcgtcccagtacgagaga
cagctgaacctgcctgtgtcacgtgaccgaggaggaagacacgtcaaaagaaaacgcagc
ccctcccctccccccaggatcacggaggcccagcagggctctgcctcaggctctgcctcg
gaggagccgggctctgcctcggaggagaggagagagagggatgacggagagaggagtgag
agaagggaccgggtggaacgagaagacaggagggagaaagagaggaacgacaggatggag
gagagaggagtggaagaggaaaccgagaggaaaaaggaggaaggaaaacctgactctccc
tcacgtcacacagcctctccacctagcgacgtcaccatggcaacgtcgccgggcaccccg
ggcctgactgaggctggcatgggtcggaactggtgggcagctgaggacccagaccaggcc
gggactcactcacaccctgccccaaacctgcctcccccccagccctcctcctctgctcct
cctcgctgggactccatctccttcccagacctgggctccaggagggacctcccctccagc
ctcccctccccagagcccagcctgcttccgggggccctggccgtggggccttgtgaggtg
accccctggctgctaaggctcagcctgcggcaggtgcacatgtcccgcggcgagcgggaa
cgagagcgggagcgcgaccgctaccggagggacgtcaacgaggaccgcgaggtgcgatgc
tgccggaactgggcggagtaccggcagctgctggcccagcggagggggcagagccacagg
gatagacccgcccacctgtgggaggggaaggtcacgcccctccatgacccccgacacccc
acctcctgtggtgagctgctggacaagatcagtgtcatcaaaccttatagactaacagat
ggaacctccagggagcagggatcggggggctggaggctgtgtttcgatgtctaccagccg
gacacagtggctgagttcaggaagagcagcccagggaagccttactctcgcatgtgtgtc
tgcagcttcgcagggccagttcctgacctcagggtggtggagcagctgatggagcagagc
ggaggtgttcctgttaccttcgctgtggtcgaccacggagacatctccttctactgcttc
aaacccttcctgttgaccacagacactgtccactga
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