Osmerus eperlanus (European smelt): 134040117
Help
Entry
134040117 CDS
T10927
Symbol
coro1a
Name
(RefSeq) coronin-1A isoform X1
KO
K13882
coronin-1A
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134040117 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134040117 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134040117 (coro1a)
04147 Exosome [BR:
oep04147
]
134040117 (coro1a)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Phagocytosis
Coronins
134040117 (coro1a)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134040117 (coro1a)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134040117 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
Beta-prop_THOC3
WD40_4
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WDCP
Beta-prop_EML
Trimer_CC
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
WD40_RFWD3
BLOC1_2
NBCH_WD40
Beta-prop_HPS5
TSC22
DUF7310
UPF0449
DUF4094
DUF5798
Lebercilin
DUF7365
bZIP_1
Beta-prop_SCAP
ABC_tran_CTD
ZapB
Motif
Other DBs
NCBI-GeneID:
134040117
NCBI-ProteinID:
XP_062342342
LinkDB
All DBs
Position
2:complement(2151616..2157318)
Genome browser
AA seq
457 aa
AA seq
DB search
MSRKVVRASKFRHVFGQGVKTDQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFI
VLPLSKTGRIDMSQPTVNGHTGPVLEIEFCPHNDNIIASGSEDCSVMIWEIPDGGLVTPL
KDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAVVRIDEVHPDLIYS
ACWNRDGSRIATSCKDKKLRVLDPRKGTVIAEKDKAHDGSRPIRAVFMADGKIFSTGFSR
MSERQVALWDPASFGEPLTLQELDTSSGVLLPFYDPDTGVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKDSQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLFPDTIGPEPSVEANEWFDGKDGQPILISLKDGFVVTKPKEFKVNKSLLKTTSSSVGYQ
QNNNEVKKVQALQEEVKTLKEAVEELTKRVSELESKN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaagttgtccgggccagtaagttccgccacgtctttggccagggggtgaag
actgaccagtgctacgatgacatcaggatttcccagatgacctgggacagcaacttctgt
tcggtcaatcccaaatttgtggccatgatcgtggacgccagcggaggaggagccttcatt
gtgctgcctctgagcaagactggtcggattgacatgtcccagcccactgtgaatggacac
acaggaccagttctggaaatcgagttttgtcctcacaatgacaacatcattgccagtggg
tcggaagactgcagcgtcatgatctgggagatcccggacggtggtttggtgactcctctg
aaggaccctgttgtcaagctcgaggggcactccaagcgagtgggcatcctgagttggcac
cctacagctcacaacgtgctcatgagtgcaggatgcgataacgtggtgatcctgtggaac
gtggcgtgtggcgaggcggtggtaaggatcgatgaagttcacccagacctcatctacagc
gcctgctggaacagggacggctccaggatcgccacctcctgcaaggacaagaagctgcgt
gttctggacccgcgcaagggcactgtcattgccgagaaggacaaggcccacgatggctcc
aggcctatcagagctgtgttcatggccgacgggaagatcttcagcacaggcttcagtcgc
atgagcgagaggcaggtggcactttgggacccggcgagctttggagagcctctcaccctg
caggagttggacaccagcagtggtgtcctcctgcccttctatgatcctgacactggcgtc
gtctacctctgtggcaagggtgatagcagtattcggtactttgaggtgacggatgaagct
ccctatgtccactacctttctatgtacagcagtaaggacagccagaaaggcatgggctac
atgccaaagaggggtcttgaggtcaacaaatgtgaaattgccagattctacaaacttcac
gagaggaaatgtgaacccattgtcatgactgtgccacggaagtcggatcttttccaggaa
gatctgttccctgacacaattggtccagaaccatctgtagaagctaatgagtggtttgac
ggcaaggacggccaacctatcctgatctccttgaaagacggttttgtggtaaccaaaccc
aaagagttcaaagttaacaaaagtcttttgaagaccacaagttcctccgttgggtatcag
caaaacaacaacgaggtaaagaaagtacaagcgttgcaggaagaggtcaaaacgctgaag
gaggcagtagaggaactgaccaagcgtgtgagcgagctggagagcaagaattag
DBGET
integrated database retrieval system