Osmerus eperlanus (European smelt): 134040135
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Entry
134040135 CDS
T10927
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134040135 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134040135 (nup98)
03036 Chromosome and associated proteins [BR:
oep03036
]
134040135 (nup98)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134040135 (nup98)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134040135 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
134040135
NCBI-ProteinID:
XP_062342362
LinkDB
All DBs
Position
19:13121081..13138226
Genome browser
AA seq
1848 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNAGFGAAGGFGASAFGATNNTGGLFGATQNKPVM
TANPQQIHTGAGRGGGLFGSSTFSQPVTSSTSSGFGFGAAGGATSSLFGSANTGGGGGLF
SQTSNAFGAAKPASFGTFGTSTASGGLFGTTNTNSNPFGAATSSLFGNTGFAATQPGTTV
KFNPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTTPMAGG
AGGLFGAAAAAPPSTAAGLFGSTATNTGFSFGQAKTSTFGPSTGGFAATSLFGQTQQPQQ
QPQQAASLFKPFGQPTATPNTGFSFGNTSTMGQPNTSSMGLFGNTAASQAGGLFGNTAQT
STATGFGAATGLFGQPNTGFGNAGAQNLFGNKTAGFGTTTTSASSFGTGTGLFGNKPALT
LGTGTNTSTFGFGANPATGGLFGNKAAPGGLGAGLGTAFGTAVGAGQTSLFGNTQNKLGA
TLGTVGGFGAPGFSTGASTLGFGAPQQPVALTDPNAAAAQQAVLQQQINALTYSPFGDSP
LFRNPLSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALTSSGSSKNQLFD
GLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYSSPVSREEDLASPSEYPHNGLSLEDD
DDVREVEPERADDPEVTKFYTKPIPHGQASQSLQDTISELNAHRPGAVGRNGLEVSSEDI
SLGDDSLQEEGEEESDSQQPAHPAGIVLGKVGYYTIPSMDELAKMLDENGECVVENFTVG
RKGYGSVFFPGVVNMTGLNLDEIVHFRRKEVIIYPDDKNKPPEGEGLNRRAEVTLDGVWP
NDKTSCTQIKSPDRLAGMNYEGRLENASRRQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEEDELPVKVDPKKLKTATSLPASLQQLPPSQQQVAPQAQTAAVLELMSRVSEVDSDMAD
ITQDAPGESALEEEEGGVQGEEVRGRLGMWTPAEQEHLSASSQIASSLGINPHTLQIMKA
SLFAEDDDGDLFHEQAGRKSAVESPRILLPGAQGRPSIGGLLQTRFRTSLFSQLPDLAPG
GGLPQRVSRGGPEASRLAPWPPLGPSFLLPSPAPETPVRTVGARRLGGPVASENSVTLGK
GRLLMDAALFAGRSFRVGWGPGWTLAHCGDRLGGGGDDLAPPGEGAGGFGFLPKPARSKK
LSDSPFKVVLEQVVAVEPGAGESQQVYQRPLEICLKHCSISTDRPCPLIQPQAGVAALHE
YAAWITELQLGEEGSDAVLDHWEQVWTLCEALWGRLASPDTEAEAEAEAGGGSQYEQQLE
RRRGFSAWLSRSAAPAIEQEVGQSQKGGHVEAIFSYLTGKRVSEACRLAQESGDHRLALL
LSQAVGSQGCRELLALQLTDWNRMQTDSFLQEDRLRIFTLLAGKPVWESTDCVVNVCSEL
DWRRCLAVHLWYMLPPSASIADALAKYQDAFQGSDAGPRYACAPLPPYIDQSEQPDMEEE
EEGGAKRPLYDICFHLLKLYSDRHYSLQQLLDPLTVSWRRLDYRLTWHLWGVLQALRYSH
LGAAPQGLLHASYAAQLEAAGMWDMAVFVLLHIPQHELRERAVREMLQLHCPLLETDESS
RKERFLTERLMVPEQWLHQAKATRARSHADHHREALHLYRAGHWNQCHRLVIQHLASDCI
INENHDYLLEFLEGLSVPERSAVIQDWDTAGRVYLQYIQVINTLHTIQQMDSAGYDLEQL
HTEVTSLCSRIEMLPCCTAKDRLAQSEMAKRVANILRVVLSLHPGAEGGSEPGHLPLASH
IDRLPMPEDYALEELRGLTQSYLRQIIVSLLATTTPKTSVPMATEKGL
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttggtgctcccttcgggggaggtaccggtggatttgggacttcg
tctacctttgggcagcaaaatgctggttttggggcggctggtggctttggtgcctcagct
tttggagcaacgaacaacacaggaggactctttggagcaacacagaataaaccagtgatg
acagccaatccacaacaaatccacactggtgcaggtagaggaggtggtcttttcggctct
agcacgttcagtcagccggtgacatcctcgaccagtagcgggtttggcttcggagctgcc
ggcggggccacgtccagcttgtttggcagcgccaacacgggcggaggaggtggactgttc
tctcagacgagcaatgccttcggtgccgccaaaccagcctcctttggcacatttggcacc
agcaccgccagtggtggcttgttcggcaccaccaacaccaactccaacccctttggagca
gcaacaagctccttgtttggtaacaccggctttgctgccacccaaccaggcactaccgtc
aagttcaatcctccaacaggaagtgacaccatggtcaaagggggggtgaccaccagtatc
aacaccaagcaccagtgtatcacagccatgaaggaatacgagaacaagtctctagaggag
ctgaggctggaggactaccaggcaggaaggaagggtcccaccaccccaatggcaggcggg
gcaggggggctgttcggggcggccgcagcggcccctcccagcacggctgctggcttgttc
ggctccacagccaccaacacagggttctccttcggccaggccaagacctccaccttcggc
cccagtacgggagggttcgcagccacgagtctgtttggccagacgcagcagccccagcag
cagcctcagcaggcagccagcctgttcaagcccttcggccagcccaccgccacccccaac
actggcttctccttcggtaacaccagcaccatgggccagcctaacactagcagcatgggg
ctgtttgggaacactgcggcatcccaggcgggggggctgtttggtaacacggctcagacc
agcacggccaccggctttggggctgccaccggactcttcggtcaacccaacaccggcttc
ggcaacgccggcgcacagaacctgtttggcaataagacggctggttttggcaccaccacg
accagcgcctcttccttcgggacaggcactggtctgttcggaaacaagcccgccctcact
ctgggaacagggacaaacacgtccaccttcggtttcggagccaaccctgcgacaggaggc
ctgtttgggaacaaggctgcccccggcggcctgggcgcggggcttggcacggcctttgga
accgctgtgggcgcgggccagacctcactgttcgggaacacccagaacaagctgggggcc
acgctgggcacggtgggggggttcggggcccctgggttcagcacgggtgccagcacactg
ggcttcggagctccacagcagcctgtcgcgctgacggaccccaacgcggcggcggcccag
caagccgtcctgcagcagcagatcaacgctctcacctactccccctttggagactcgccc
ctcttcaggaacccgctctccgaccccaagaagaaggaggagcgtctgaaaccgaccaat
ccggcagcccagaaggctctgaccacgcccactcactacaagctgaccccccggcccgcc
acgcgcgtgcgccccaaagctctgacatcatccggctcctccaagaaccagctgtttgac
gggctagacgacgacgagccctcgctcaccaacggagccttcatgcccaggaagagcatc
aagaagctggttctgaagaacctgaacggcagcagcctgtacagcagccctgtcagcaga
gaggaagacctggcctccccctccgagtaccctcacaacggactcagcctggaggatgat
gatgacgtgagagaggtggagcctgaaagagccgacgaccccgaggtcaccaagttctac
accaagcccatcccccatggccaggccagccaatccctgcaggacaccatctcagagctc
aatgcccataggccaggggccgtggggaggaacggcctggaggtgagcagcgaggacatc
tccctgggagacgactccctccaggaggaaggagaggaggagtcagactcccagcagccc
gcccaccctgcagggatcgtgctggggaaggtgggatactacaccatcccctccatggac
gagctggccaagatgctggatgagaacggagagtgtgtcgtggagaacttcactgtgggc
aggaaaggctacgggtcggtgttcttccccggggtggtgaacatgactgggctcaacctg
gacgagatcgtccacttcagacgcaaggaggtcatcatctacccagacgacaaaaacaag
cctccggagggggaggggcttaacaggcgtgcagaggtgaccctggatggggtgtggccc
aacgacaagacgagctgcacccagatcaaaagccctgataggctggcagggatgaactac
gagggccggctggagaacgcgtcgcgcaggcagggagctcgcttcctggagtaccgtcca
gagaccggctcctgggtgtttgaggtggcacacttctccaagtacggcctccaggactct
gacgaggaggacgagcttcctgtcaaagtggaccccaagaagctgaagacggcgacctca
cttcctgccagcctgcagcagcttcctccctcccagcagcaggtggcgccacaggctcag
actgctgcagtgctggagctaatgagccgtgtgtcggaggtggacagcgacatggcggac
attacccaggatgcccctggagagagcgcgctggaggaggaggaggggggtgttcagggg
gaggaggtcaggggtcgcctgggcatgtggacccccgcagagcaggaacacctgtcagca
tccagtcagatcgcctcctctctggggatcaaccctcacaccctacagatcatgaaggct
tctctgtttgctgaggatgatgatggtgacctgttccatgagcaggcagggaggaagagc
gcagtggagtcccctcgtatcctgttgcctggcgcccagggcagaccctctatcggaggt
cttctccagactcgcttcaggacctctctgttctcccagctgcccgacctggcccctgga
ggggggctccctcagagggtgtcccggggtggccccgaggcctcccgcctggccccctgg
ccccccctggggccctccttcctgctgccctcccccgcccccgagacccccgtcaggacc
gtgggggcccggaggctgggagggcccgtggcctccgagaactctgtcactctgggcaag
ggtcgcctgctgatggatgcggcgctgtttgccggccgctcgttccgcgtgggctggggc
ccgggctggactctggcccactgtggagaccggctgggcggggggggcgacgacctggct
cccccgggggagggggctggagggtttgggttcctgcccaaacctgccaggagcaagaag
ttgtcagacagcccgttcaaggtggtgctggagcaggttgttgccgtggagccgggggcg
ggtgagagccagcaggtgtaccagcgccccctggagatctgcctgaagcactgcagcatc
tccacagacaggccctgccccttgatccagccgcaggcaggggtggcggccctgcacgag
tacgccgcctggatcaccgagctgcagctgggggaggagggcagcgacgctgtgctggac
cactgggagcaggtgtggaccctgtgtgaggctctgtggggccggctggcctccccagac
actgaggctgaggccgaggctgaggccgggggcgggtcccagtacgagcagcagctggag
aggaggcggggcttctcagcctggctgtctcgcagcgccgcccccgccatcgaacaggaa
gtggggcagagccagaagggcggccatgtggaggccatcttcagctacctgacggggaag
agagtcagcgaggcctgcaggctggcccaggagagcggggaccaccgcctggccctgttg
ctgtcccaggctgtgggctctcagggctgccgggagctgctggctctgcagctgactgac
tggaacaggatgcagacggactccttcctgcaggaggacaggctgcgcatcttcaccctg
ctggcaggcaaacctgtgtgggagtcgacagactgcgtggtgaacgtgtgttcagagctg
gactggagacgctgcctagcggtgcatctgtggtacatgctgccgcccagcgcctccatc
gccgacgcccttgccaagtaccaggacgccttccagggctctgacgcaggtcccaggtat
gcctgcgcacccctgcccccctacatcgaccaatcagaacagccggacatggaggaggaa
gaggagggaggggctaagaggccactgtacgacatctgcttccacctgctgaagctctac
agcgacagacactacagcctgcagcagctgctggatcctctgacggtgagctggcgtcgt
ctggactaccgcctgacctggcacctgtggggcgtcctgcaggcgctgcgctacagccac
ctgggcgctgcgccgcagggcctgctccacgccagctacgctgcccagctggaggctgca
ggcatgtgggacatggccgtgttcgtgctgctgcacatcccccagcacgagctgcgtgag
cgtgctgtgagggagatgctgcagctgcactgccccctgctggagactgacgagtcgagc
cggaaggagcgcttcctgacggaacggctgatggttccggaacagtggctccaccaggcc
aaggccacgcgtgcccgcagtcacgctgaccaccacagggaggcgctgcacctatacagg
gccggacactggaaccagtgtcacaggctggtcatccagcacttggcctcagactgtatc
atcaacgagaaccatgactacctgctggagttcctggaggggctgtccgtccccgagcgc
agcgctgtcatccaggactgggacacggccggcagggtgtacctgcagtacatccaggtc
atcaacaccctgcacaccatccagcagatggacagcgcagggtacgatctggaacagctc
catacagaagtgacgtcactgtgcagcaggatagagatgctcccctgctgcaccgccaaa
gaccgcctcgcccaatcagagatggccaagcgcgtggccaacatcctgagggtggtcctc
agtctgcacccgggggccgaggggggatctgaacctgggcaccttcccctggcctcccac
atagaccgcctgcccatgccggaggactacgccctggaagaactccggggcctcacccaa
tcatacctgaggcagatcatcgtcagcctattagcaaccaccacacccaaaacctctgta
cctatggcaaccgaaaaaggattgtaa
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