Osmerus eperlanus (European smelt): 134040643
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Entry
134040643 CDS
T10927
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep02010
ABC transporters
oep04145
Phagosome
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134040643 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134040643 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134040643 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oep02000
]
134040643 (tap2a)
Enzymes [BR:
oep01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
134040643 (tap2a)
Transporters [BR:
oep02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
134040643 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_30
AAA_29
Motif
Other DBs
NCBI-GeneID:
134040643
NCBI-ProteinID:
XP_062342636
LinkDB
All DBs
Position
20:1146173..1151414
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AA seq
714 aa
AA seq
DB search
MIRKIFVCGLALGIDIAIFCAPEIGSKSYDALRSLLHIWAVASLRLAILYGILLLDVGSL
KPVLKRVLAGHCLLAPLYETGRVLTYGWPEDSASGPLGGLSAWLLCTVSAAAAALFWETT
IPDSDGQNGKENKRKARVLFMRVVRFYKPDYLILVGAFVFLSLAVLCEMFIPFYTGKVID
ILGSQYQWDDFRSAILFMALYSFGSSFSAGCRGGLFMCCISSFTCRIKVLLFGALVKQEI
GLFEAIKTGDITSRLSKDTTLMGRTVALNVNVLLRTLIKTGGMLSLMVSLSWKLTLLMLM
ETPVTGLLQSVYDSHYQRLSQEVQNSMARANEAAGEAVGGVRVVRSFNTLRGEARRYDNR
LMDTHNLKTKRDTVRAVYLLVRRLTELGMQVIMLYYGRLFIQRGQMTTGNLVSFIIYQGD
LANNIRTLIYIFGDMLNSVGAADKVFEYLDREPQVSTKGTFEPDQLLGHVQFQNLTFSYP
SCPDHKILQEFSLELLPGQVTALVGPSGGGKSTCVSLLERFYQPQQGEILLDGKPIHTYE
HHYLHRKVAMVGQEPVLFAGSVRDNIAYGLEDCPLEKVQEAARRANAHNFINQLEKGYDT
DVGERGGMLSGGQKQRIAIARALIRDPQVLILDEVTSALDTESEHMIQQTLAKIPSQTLL
VIAHRLKTIEEADRIVVIGEGKVQEQGTHQELMDRKGTYYKLREKLFTEEDTIH
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtaaaatattcgtctgtggtttagcattagggatagacattgcgatattttgc
gcaccggaaattggatcaaaaagttacgatgctctcagaagtttactccatatttgggca
gttgccagtcttcgattggcaattctatacggtattttgctacttgatgttggatccttg
aaaccggtgcttaagcgcgttttagcgggacattgtcttctcgcaccgttgtatgagact
ggtagagtgctaacgtacggatggccggaagacagtgcaagtggaccgctgggaggtctc
agcgcttggcttctgtgtacagtgtctgcagcagccgctgctctgttttgggagacgaca
ataccagacagtgatggacaaaacggcaaagagaataaacgcaaggcgcgggtgttgttc
atgagagtcgtccgtttctacaagcctgactatcttatattggttggagcgtttgtcttc
ctgtctctcgcggtgctatgtgagatgttcatcccattctacacaggaaaagtgatagac
atcctgggatcccagtaccagtgggatgacttccgctctgccatcctcttcatggcactc
tactcctttggaagctcgttcagcgccggctgcagaggaggcctgttcatgtgttgcatc
agcagcttcacctgcaggatcaaggtgttgctgttcggagctctggtcaaacaagagatc
ggtctgttcgaagccatcaagacaggtgacatcacgtccaggctgtccaaggacacaacg
ctgatggggcgcacggtggccctgaacgtcaacgtgctgctgaggacgctgatcaagacc
ggagggatgctgtccctcatggtcagcctgtcctggaagctcactctgctcatgctcatg
gagacccccgtcaccggcctgctgcagagcgtctacgacagccactaccagaggctgtct
caggaggtgcagaactccatggcccgggccaacgaggctgctggcgaggcggtgggaggc
gtgcgcgtcgtacgcagcttcaacaccctgcggggcgaggcccgtcgctatgacaacagg
ctgatggacacgcacaacctgaagactaagagggacaccgtccgggcggtttacctgctc
gtgaggaggctgacagagctggggatgcaggtgatcatgctgtactacggcaggctgttt
atccagagaggtcagatgaccacggggaaccttgtctccttcatcatataccagggggac
ctggccaacaacatcaggactttgatctacatctttggagacatgctgaactcagtgggg
gcagctgacaaggtgtttgagtacctggacagggaaccgcaggtcagcactaagggaaca
ttcgaaccggaccaacttctcggacacgtccagttccagaaccttaccttctcttaccca
agctgccctgatcacaagattctccaggagttctctcttgagctgcttcctggtcaggtg
accgccctggtggggccgtctggaggcgggaaaagcacctgcgtcagcctattggaacgc
ttctaccagccccagcaaggagagattctattggacggaaagcctatccacacctatgag
caccactatctacacagaaaggtggccatggtgggccaggagccggtgctgtttgccggg
tcagtcagagacaacatagcctacggcctggaggactgtcctctggagaaggtgcaggag
gctgctcgcagggccaacgctcacaacttcatcaatcagctggagaagggatacgacacg
gacgtcggggagagagggggcatgctgtccggaggccagaagcagcgtatcgccatcgcc
agagccctcatcagagaccctcaggtcctcatcctggacgaggtcaccagcgcactggac
actgagagcgaacacatgattcagcagacactggctaagatcccctcccagaccctgctg
gtgatagctcataggctgaaaaccattgaggaggcggaccgaattgttgtgattggtgag
ggcaaggtgcaggaacaggggacccaccaggaactgatggacaggaagggtacctactac
aaactgagagagaagctcttcaccgaagaagacacaatacactga
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integrated database retrieval system
