Osmerus eperlanus (European smelt): 134040746
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Entry
134040746 CDS
T10927
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134040746 (rnf115b)
04121 Ubiquitin system [BR:
oep04121
]
134040746 (rnf115b)
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134040746 (rnf115b)
Membrane trafficking [BR:
oep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134040746 (rnf115b)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134040746 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_19
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
C1_2
HypA
DUF7560
U-box_ZFPL1
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
134040746
NCBI-ProteinID:
XP_062342792
LinkDB
All DBs
Position
20:8971075..8974360
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AA seq
309 aa
AA seq
DB search
MAEAAATPEHRFFCHCCKGEINPKLPEYVCPRCDSGFIEEVTEDFSLLENSNADPSEDAG
TLFSELWQLLFMERSALLSEPPGSGSDSDVEPSPSPVPGSTASNLVGEGLEGRIPGVLFR
GSETIAPEPPSSPPGQERRPSRPDPTPAVEGIVQQFLAGLFSNNGNPGTASASLTSMLHS
NPGDYAWGQGGLDAVITELLGQFESTGPPPAEKEMISSLPTVSISREQTDCRLECPVCRE
EFSVEESVRQLPCLHYFHSDCIVPWLELHDTCPVCRKSLDGVDNSAKPTSEPPEALSIRA
EPQEERQAI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcgacaccagaacaccgctttttctgccactgctgtaaaggtgaa
atcaacccaaaactcccggaatatgtttgcccaaggtgtgattcaggctttattgaggag
gtgacagaagacttcagtctcctggagaacagcaatgcagaccccagtgaagatgcaggc
acgctcttctcagagttgtggcagctgctgttcatggaacgctctgccctcttgtcagag
ccccctggctctggctctgactctgacgtggaacccagccccagccctgtccctgggtcc
accgcctctaacttggtaggggaaggcctggagggcagaatcccaggagtcctctttaga
ggcagtgagaccatagcaccagagcctccctcttctccccctggtcaagagaggagacca
tccaggcctgacccaacaccagctgtggaggggattgtgcagcagttcttagccggtctg
ttttccaacaatgggaatccaggcaccgcatcagcctcactaactagtatgttgcactcc
aacccaggggactatgcctggggtcaggggggtctagatgctgttatcacagagttgtta
ggtcagtttgagagcacaggtcccccccctgcagagaaagagatgatctcatcccttcca
acagtcagcatctctcgagaacagacagactgcagattggagtgtccggtgtgtagggaa
gagttctctgtggaagagtctgtcagacaactaccctgcctccattattttcacagtgat
tgtattgtgccatggctggaactgcatgatacctgtccggtgtgtcggaaaagtcttgac
ggtgttgacaacagcgcaaaacccacgtcagaaccccctgaggctctctccatcagagca
gaaccacaggaagagagacaagccatttga
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