Osmerus eperlanus (European smelt): 134040759
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Entry
134040759 CDS
T10927
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oep04990
]
134040759 (snx13)
Domain-containing proteins not elsewhere classified [BR:
oep04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134040759 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
134040759
NCBI-ProteinID:
XP_062342812
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All DBs
Position
20:complement(10877362..10899219)
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AA seq
979 aa
AA seq
DB search
MSNIADRRKSLWLQHIIQASLSIWGWGGLGVVLFLITFGPFAIFYLAFYIFCFVGGGFAV
TLLYGRTNSEKHLETCEHSYLPPTATGILKTLDEMKLEQKPIKIDRRLTGSNFIDEPLQQ
VIQFALRDYIQYWYYTLSEDDSFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFA
THLRVFRKAQDRLGEREDNKHRDVSEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLR
DLCEVLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSC
NYEAFMNILKLTDRVAELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCE
TRIQRLQSGKEVDALKLAANFGKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLT
VEGYRVTAQQQLEVMEALQKDGRKQAGATKGLLKAAALGVFEQYLSDKASPRVQVDEASV
VRLGEKLQKEDPTPEIFDDIQRKVYDMMLRDERYYPSFRQSPLYVRMLAELDMLKEPSFR
GSDDGDGESFNGSPTGSINLSLDDLSNSCHDDTMQLHAFISDTADASLPLLLGAGVCNDH
GKTYALYAITVFRRSQDGSEDCWKTYRRYSDFHDFHMRITEQFENLTSILKLPGKKTFNN
MDREFLEKRKKDLNTYLQLLLNPEMVKACPTIVPYVYDFLENKAYSKGKGDFARKMDTFV
NPLRSSMRNVSQAVKSLPDSLAEGMNKVSDNMGRMSERLGQDFKQSVFKVPPMLPKSNID
PEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTI
NRKIVDHVDYMTSPEQVADYVKKFRDSYWPNGILAETLPRRDKSIRMRTRVAAKTNLLGI
MPDELKHIIGADTTRKGILRVFDMFQHQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLH
SRSPRTHRYSQKQKACFKR
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacattgctgacagaagaaaatctttatggcttcaacacattattcaggccagt
ctgtccatctggggatgggggggtcttggagtcgtgcttttcctcatcacctttggaccc
tttgctatattttatctggccttctacatcttctgcttcgtcggagggggttttgccgtc
acgctgttgtacgggaggaccaactcagagaaacacctggagacgtgcgagcactcttac
ctgccgcccacggcaacgggtatcctgaagacgctggatgagatgaagctggagcagaag
cccatcaagatcgaccggaggctgaccggctcgaacttcatagacgagccactgcagcag
gtcatccagtttgcgttgagggactatatccagtactggtactacactctgagcgaggac
gactctttcctactggagatcagacagaccctccagaatgcactcgtccagttctccaca
cggtccaaagaggtggactggcagccttacttcaccactcgtctggtggacgacttcgcc
actcacctgcgagtcttcaggaaggcccaggacaggctgggagagagggaggacaacaag
catagagatgtatctgaagagctggtggactcgttcttcgaggccgaggtggagatggag
aggaagatctgtcgagacgtggtgtgcacctctcacaaagacgaggagggtttcctgagg
gacctgtgtgaggtgctgctgtatctgttactacctcctggagactttcacaacaagaac
atgaggtacttccttagggaggtcctggctcgaggggtgctacttcctttgatcaaccag
ctcagcgacccagactacatcaaccagtttgtcatctggatgatcagagactcaagctgt
aactacgaggccttcatgaacattctgaagctgacagacagagtggccgaactggaagcg
gtcaaagacaaggccctggaggaactccagtacctgcgctcgctggacacggcgggagat
gacatcaacgtgataaagaatcagatcaacagtctgctgtttgtgaagaaagtgtgtgag
accaggatccagaggctccagtcaggcaaggaggtggatgccttgaaactggcggccaac
ttcggcaagctgtgcatcatacctctggagcacatcctagtgcacaacatcgccctgcag
ttcttcatggactacatgcaggcagcgggggcccaggcggagctgttcttctggctgacg
gtggagggctaccgggtgactgcccagcagcagctggaggtgatggaggccctgcagaag
gacggcaggaagcaggcgggggccaccaaaggcctgctgaaggccgcagcgctgggcgtg
ttcgagcagtacctctctgacaaggcctcccccagggtccaggtggacgaggccagtgtg
gtgaggctgggggagaagctgcagaaggaagaccccacgccagaaatatttgacgacatc
caaagaaaggtgtatgacatgatgctgcgtgatgagaggtactacccctccttcagacag
agtcctctgtacgtgcgcatgctggctgagctggacatgctgaaggagcccagcttcaga
ggttcagacgacggggacggagaatcattcaacggttctccgacaggaagcataaatctg
tctctggacgacctgtcaaactcctgccatgacgatactatgcagctacatgccttcatc
tctgatacagctgatgcttctctccccctcctgctgggcgcaggggtgtgtaacgaccac
ggtaagacctacgcgctgtacgccatcaccgtgttccgccgcagccaagacggcagcgag
gactgctggaagacctaccgccgctactctgacttccacgacttccacatgaggatcacg
gaacagttcgagaacctgacctctatcctcaaacttccggggaaaaagactttcaataac
atggacagagaattcctggagaagaggaaaaaagacctcaatacatacttacagttgctg
ctgaacccagagatggtgaaggcctgccccactattgttccgtacgtgtatgatttcctg
gagaacaaggcctacagcaagggcaagggagactttgcacgcaagatggacacgtttgtg
aacccgctccgcagctccatgaggaacgtgtcccaggccgtcaagtcgctccctgacagc
ctggccgaggggatgaacaaggtctccgacaacatgggccgcatgtcagagaggctgggg
caggacttcaagcagtccgtattcaaggtgcctccgatgctgcccaagtccaacatcgac
ccggaacactgccgagtctccgcccagctggatgataacgtggatgacaacatccccctg
cgtgtaatgctcctgctgatggacgaggtgttcgacctgaaggagaggaaccagtggtta
cgcagaaacatcaagaaccttctgcagcaactcatcagagccacctacggagacaccatc
aacaggaagatcgtggatcatgtggactacatgacttctccagagcaggtggcagactac
gtcaagaagttcagggattcatactggcccaatggtattctggctgagactctacctcgc
cgggacaagagcatccgcatgaggacacgagttgctgccaagaccaacctcctggggatc
atgccagacgagctaaagcacatcatcggagcagacaccacccgcaagggcatcctccgc
gtcttcgacatgttccagcaccagcccatgaaccgccgcctggtctacgtgttcctcgag
ggcttcctagagaccatgttcccccagtacaagttccccgagctgttcgtcaagctgcac
tcccgctcgccgcgcacacacagatactcgcagaaacaaaaagcctgcttcaagaggtga
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