Osmerus eperlanus (European smelt): 134040845
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Entry
134040845 CDS
T10927
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a
KO
K23619
collagen type XXVIII alpha
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134040845 (col28a1a)
Peptidases and inhibitors [BR:
oep01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
134040845 (col28a1a)
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GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
DUF1194
VWA_CoxE
CBM-like
QTMAN_N
Motif
Other DBs
NCBI-GeneID:
134040845
NCBI-ProteinID:
XP_062342963
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Position
20:6110256..6123876
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AA seq
1184 aa
AA seq
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MRRAVQLFLLLVVLSHTARGQGRRRKGERDDNQIIINEGKTLICPVEIMFIVDSSEKAKA
LLFEKQKEFVLRFSTRLMQLQASGWRLRVRLAALQYSSSISLEHNFRDWQDVDVFQSRVA
AMAYIGHGTYSAYAISNATQVFNRETAASSLRVALLMTDGVDHPRSPSAVSAAAQAKNYN
IRVFAIGLSSLSRDRLTSSRLRSIASAPPQQYVLSLTDDQLEDKLFRELSAIVNTGCPLP
KSCLCDKGERGPPGSSGKIGEPGSDGAPGPKGSRGEPGINGRPGMEGLEGRSGTRGEKGE
RGECGAPGMKGDQGPDGPPGPRGLRGEQGPNGSAGDQGPEGPTGPKGDRGPSGTSGPPGD
TGIGFPGPKGDKGNQGRPGLTGPVGMGEPGLPGPPGPSGLQGSQGFPGEGLPGPKGDRGY
EGPKGSRGPPGLGIKGDQGNTGTPGLAGLMGFPGAGIQGEKGDQGPVGPSGPRGPPGLGI
VGPKGEQGFPGVHGSQGERGVGEPGPKGDPGPDGASGFPGIPGEDGAVGPKGEMGLPGHR
GTEGTPGKGIPGDKGDRGDRGLRGLSGSPGPVGPAGAKGEPGSLGMMGLPGPPGRGLPGS
KGDPGPGGISGPVGEPGMGITGPKGDRGNPGPVGPPGMKGDGYPGPQGLPGLPGQPGEMG
PEGKGLPGPKGDRGSPGVSGPSGPPGIGLFGLKGSMGQPGAPGLSGIPGEGIQGPKGEPG
FQGPMGPRGPPGDGLAGEKGDRGVTGDRGRKGDRGNLGEPGSGGPMGRPGEKGEAGLTRD
QVIKIIREICGCGLKCRESPLELVFVIDSSESVGPENFEVVKDFVNALIDRMSVSREASR
IGVVLYSHVDVVVVSLTQLSSQGDVKAAVRKMAYLGEGTFTGSAIQRANQLFQAARPGVR
KVALVLTDGQADRRDAVQPEDAAAEAHAAGIEMFVIGVVNKSDPQYAEFQAEMNAIASDP
DEEHVYLIDDFMTLPTLESKLLSRICEHDDGTLFIPNSFPPPAPVVTLAPVSPPEVYRET
PDWGASPGFDEKNRRYDTEAETVTLPYSQPAEPEDFNENTIATSFVEEPFYKLPDLGTSS
SEGRGQQSHVISVVGPQTPNNWLYIPEATKPTTTQPPLPALPDIFVADVGCRLSLDPGPC
RQYVVKWYYDPEANACAQFWYGGCQGNANKFETEANCKNACVYT
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagcagtgcagctgttcctcctgttggtggtgctgtcccacacggccaggggt
cagggtaggagacgcaagggagagagggacgacaaccagatcatcatcaatgaagggaaa
actctgatttgccctgtggagatcatgttcatcgtggacagctcagagaaggccaaggcg
ctgctgtttgagaagcagaaggagtttgtcctgaggttcagcacccgtctgatgcagctg
caggcgtcgggctggcgtctgagggtgcgcctggccgccttgcagtacagcagctccatc
tccctggagcacaacttccgcgactggcaggacgtggacgtgttccagagccgggtcgct
gccatggcctacatcggtcacggcacctactcggcctacgccatcagcaacgccacgcag
gtgttcaaccgcgagacagccgcctccagcctgcgggtggcgctgctgatgaccgacggc
gtggatcacccccgcagccccagtgcggtcagtgctgccgcccaggccaagaactacaac
atccgggtgtttgctatcgggctgtccagtctgtccagggaccgtcttaccagctcccgg
ctgcgctccatagccagcgcccctccacagcaatacgtcttgagcctcaccgatgaccag
ctggaggataaactcttcagagaactgagcgcaattgtcaacactgggtgccccctgccc
aaatcctgtttgtgtgataaaggagagagaggtcctcctgggagctcagggaaaataggg
gaaccaggatctgatggggctccagggcctaaaggatctcgtggggaaccagggatcaac
ggacgcccaggaatggaaggtcttgagggtcgttctggcactagaggggagaagggggag
cgaggcgagtgcggcgccccagggatgaagggagatcaaggtccagatggtccaccaggc
ccacgaggactcagaggagagcagggcccaaatggaagtgcaggagaccagggacctgag
ggaccgaccgggcccaaaggtgaccgtggacccagtggaacaagtggacctcctggtgat
actggtattgggtttcctggaccaaagggggataaggggaaccaaggaagaccaggactg
actggaccagtaggcatgggtgaaccaggcttaccgggaccacctgggccctctggtctg
caagggagccagggctttcctggagagggtctcccaggcccgaagggtgaccgaggttac
gaggggcccaagggcagccgtggacccccaggattagggataaagggtgaccaggggaac
acaggcacccctggactggctggcctgatgggatttccaggagcaggtatccagggagaa
aagggagaccaagggccagtggggccttctggacccagagggcccccggggctagggatt
gttggacctaagggtgagcagggcttcccaggggttcacgggtctcagggagagaggggt
gtcggggaaccagggcctaagggggatccaggacctgatggagcttctgggttccctggg
atcccaggggaggatggagctgtcgggcccaagggggagatgggattgcctggccaccgc
ggcactgagggtacgcctgggaaaggaattcctggagataagggtgacaggggtgaccgg
gggctaagggggctctcaggatctccagggccagtgggaccagcaggagccaagggggag
ccgggcagcctgggaatgatgggcctacctggtccccctggacgaggcctgcctggatca
aagggagacccagggccagggggtatatctgggcctgttggggagccaggcatgggtatc
acagggcctaagggtgacagagggaatcctgggcctgttggacctccagggatgaaggga
gatggttatccaggaccccagggactaccagggttgccaggacaacccggggaaatggga
ccagaggggaaaggacttcctggccctaagggtgacagaggttctcctggagtcagtggg
ccatcaggaccaccagggatcggcctcttcggacttaagggctcaatgggacagcctggt
gcacctggtctgtctggtatccccggtgagggaatccaagggccaaagggagagccgggc
ttccaggggccaatgggtccccgagggcctccaggggatggcctagcaggagagaaggga
gataggggtgtcacaggtgaccgtggaaggaaaggagacagaggcaacctcggagaacca
ggatcaggaggaccaatggggagacctggtgaaaagggagaagctggactgaccagagat
caagttatcaaaatcatcagggagatatgtggctgtggactgaagtgtcgggagagcccc
ctggagctggtgtttgtgatcgacagctccgagagcgtgggccccgagaactttgaggtg
gtgaaggactttgtcaacgcgctgatcgaccgcatgtcggtgagccgcgaggccagccgc
atcggcgtggtgctgtacagccacgtggacgtggtggtggtcagcctgacgcagctgtcc
agccagggcgacgtcaaggccgccgtcaggaagatggcctacctgggcgagggcaccttc
accggcagcgccatccagcgggccaaccagctgttccaggccgcgcggcccggcgtcagg
aaggtggccttggttctcacggacgggcaggcggaccgccgtgacgcggtgcagcccgag
gacgcggccgcggaggcccatgccgccggcattgagatgttcgtgataggcgtggtgaat
aagagcgatccccagtacgcagagttccaggctgagatgaacgccatcgcctccgatcca
gatgaggagcatgtttacctgatcgatgacttcatgacactccccactctagaaagcaag
ctactgagccggatctgtgaacatgacgacggcacccttttcatccccaactccttccct
ccgcctgctcctgtcgtcacccttgcacctgtctccccgcctgaggtctacagggagacc
ccagactggggggcatcacccggcttcgatgagaagaacagacgatacgacaccgaagca
gagacggtgacgttgccgtattctcaacctgccgagccagaggactttaatgagaacaca
atcgctaccagctttgtggaggagcccttctataagctccctgacctcgggacttcctca
tctgagggccggggacagcagtctcatgtcatctcagtagtgggcccccagacccccaat
aactggctttacatcccagaggccacaaagcccaccaccactcagccacctctacctgcc
ctgccagacatttttgtagcagatgttggctgtaggctgtccttggacccggggccatgt
cgacagtatgtggtgaagtggtactacgatccagaggcaaatgcctgcgcccagttctgg
tatggaggttgccaaggcaacgcaaataaatttgagactgaggcaaattgcaagaacgcc
tgtgtctacacgtaa
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