Osmerus eperlanus (European smelt): 134040868
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Entry
134040868 CDS
T10927
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134040868 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oep03021
]
134040868 (ctdp1)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
134040868 (ctdp1)
Protein phosphatases and associated proteins [BR:
oep01009
]
HAD phosphatases
Fcp/Scp phosphatases
134040868 (ctdp1)
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134040868 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
RAP1
Nairovirus_Gn
Motif
Other DBs
NCBI-GeneID:
134040868
NCBI-ProteinID:
XP_062343003
LinkDB
All DBs
Position
20:complement(4885036..4930833)
Genome browser
AA seq
996 aa
AA seq
DB search
MEDPADSGGGGAVEGPMVQVAEICCPVGARPLRLLEWKVKPGSLVNVDSVLALCAPIPLE
KESGTDALEQQKRLPEKKLKSNRAGVVKELCCQLGQVISPGGVIIRIEECSHPIVMKGLC
AECGQDLTQLQNKNGKQQAHISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNKKLV
LMVDLDQTLIHTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHV
FTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPYSKTGNLRNLFPCGDSMVCIIDDR
EDVWKFAPNLITVKKYIYFQGTGDINAPPGSREAQMARKGGGQASKAAESSGTATAGTSA
AEEHNNGLRKRGKDCNNGGREETAAPPTTQEAPANQRTRPEESAEDGASRGTGAEAEGGQ
GSAMAQVRDGTNAKGEDGSRTLGTEETAQASDPGPEANNLDFDLSSDSDSDSPRDKPPSS
DSDVEGKLSRSRIPKVEGGVPEDSALKEVENNGSGAAGENSSEAGEPPGVVLPDPELGNG
CSEPDRREAETESQNSEQSGVTMGEESLDQSMEDEEDDEEEEADVDQDDHLIYLEGVLER
IHAEYYARYEAYLRKENTETPDIRKIVPELKSRSLEGTTIVFSGLYPTNYPMERTRECYH
AKALGAKIGKGLVLSSKESGSTTHLIAARAGTEKVRQAQGCRHLHVVNPDWLWGCLERWE
RVDEVLYPLKEDYTKTQRSSSPATFPDVHGAFQNPLYHPVPIHHKVQPSAPEVRTYDPVT
GKLIRRGPQASRPPSYFQAPGSCLSMPAHGEPSSHRGSQKPQQQGDGAVAGSSQDDEQPG
PSRRKRQPSMSESMPLYTLCKEDLDSMDREVDDILGEESDNESEERGKKLGEEEDEEEEA
ERSQVGASRTPKGEQHGSQALGTVVKERTETRWSGEGSPADNVSRGHKRKLDEAKGEEEA
GDSVDESTKDSNEEEGSSSEADEMAAALEAELNDFM
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccctgcagattccggcggtggcggtgcagtagagggccccatggtgcaagtg
gcagagatctgctgccctgtcggtgcacgtcctctgcggttgcttgagtggaaagtcaaa
cccgggtcactcgtcaatgtcgactctgttcttgcactatgtgctcctattccgctggaa
aaggagtccggcaccgatgcactagagcagcagaaaagactgccagaaaagaagctgaaa
tcaaaccgtgctggagttgtcaaggagctctgctgtcaacttgggcaagtcatatcgcca
ggtggtgtcatcatcagaatagaagaatgcagtcatcccatagtgatgaaggggctgtgt
gctgaatgtggacaggatctaacacagctacagaacaagaatgggaagcagcaagcgcac
atctccacggcaaccgtctctatggtgcacagtgtgcccgagttgatggtcagctcagag
caagcagagcagctgggcagagaggatcagcagcggctgcacaggaacaagaagctggtt
ctgatggtggatctggaccagacgttgatccacaccaccgaacagcactgccagcgaatg
tccaacaagggaatcttccacttccagctggggcgcggagagcccatgttacacacccga
ctgcggccacactgcaaggacttcctggaaaaaatagccaagctctatgagttgcatgtc
ttcacttttgggagccgcctgtatgcacataccattgcaggttttttggacccagaaaag
aaactattttcgcaccgcattctctcgagagacgagtgcatcgacccctactccaagacg
gggaaccttaggaaccttttcccttgcggcgactccatggtctgcatcattgacgaccgc
gaggacgtgtggaagtttgcgcccaacctcatcacggtgaagaagtatatctacttccag
ggcacaggggacatcaacgcccctccagggtcacgagaggcacagatggcaagaaaaggt
ggaggccaggccagcaaggcagcagagagctcggggacggcgacggcgggaacgtcggca
gcagaggagcacaacaacggcctcaggaaacgggggaaggactgcaacaacggcggcagg
gaggagacggccgcacccccaaccactcaggaagcacccgccaaccaacggactcggccg
gaggagtccgccgaggacggggcgagtcggggcacgggagccgaggcagagggcgggcag
gggagcgccatggcacaggtacgcgacggcacgaatgcaaaaggagaggacggcagcagg
acattgggaacggaggaaaccgcacaagcctccgatccaggaccggaggccaacaacctg
gactttgacctctccagcgacagcgacagcgactcccccagggacaagcccccctcgtca
gacagcgacgtggaggggaagctaagccgctcgaggatacccaaagtggagggaggggtt
cccgaggattctgccctcaaggaggtggagaacaacgggagcggagcagctggagagaac
agctccgaggcgggggaacctccaggagtggttctcccggacccagagctggggaacggc
tgctccgagccagacaggagggaggccgagacagagtcccagaacagcgagcagtccggg
gtcaccatgggcgaggagtccctggaccagagcatggaggatgaagaggacgacgaagaa
gaggaggccgatgtggaccaggacgaccacctgatctacctggagggggttctggagagg
atccacgccgagtactacgcccgctacgaggcctacctgaggaaggagaacaccgagacc
ccagacatccgtaaaatcgtcccagagctgaagagcaggtctctggagggcaccacgatc
gtgttcagcggcctctatcctaccaactaccccatggagaggacgcgcgagtgctaccat
gccaaggctctgggggccaagatcggcaagggcctcgtgctcagctccaaggagtccgga
agcacaacgcatctcatcgctgcacgtgctggcacagagaaggtgcgtcaggctcaaggc
tgcaggcacctccacgtggtcaatcctgattggctgtggggctgtctggagcgctgggag
cgtgtggatgaagtgctgtacccgctgaaggaggactacaccaagacacagcggagcagc
agcccggctacgttccctgacgttcacggggccttccagaaccctctctaccacccagtc
cccatccaccacaaagtgcagccctctgcgcccgaggtccgaacgtacgaccccgtcacg
gggaaactgatccgcaggggtcctcaggcctctcgtccaccatcttacttccaggccccg
ggctcgtgtttgtcgatgcctgctcacggagagccgtcctctcacaggggttcccagaag
cctcagcagcagggcgatggggccgtggcggggtccagccaagacgacgagcagccgggg
ccgtctcgcaggaaacgtcagcccagtatgtcggagagcatgcccctgtacaccctctgc
aaggaggacctggacagcatggacagagaggtggacgacattctgggcgaggagagcgat
aatgagagcgaggagcgggggaagaagctcggcgaagaggaggatgaagaggaggaggca
gagcggtcacaggtgggcgcgtcgagaaccccgaagggagagcagcacggctctcaggcc
ctcggcaccgtcgtcaaggagaggacggagacacgatggagcggcgagggcagcccggca
gacaatgtgtcaaggggacacaaacgaaagcttgacgaggccaaaggagaagaggaggcg
ggcgactcggtggacgagtccaccaaggactccaacgaggaggagggcagcagctccgag
gcagacgagatggcggccgccctggaggcagagctcaatgacttcatgtga
DBGET
integrated database retrieval system
