Osmerus eperlanus (European smelt): 134040908
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Entry
134040908 CDS
T10927
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134040908 (zgc:91944)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134040908 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
Med3
HTH_3
Motif
Other DBs
NCBI-GeneID:
134040908
NCBI-ProteinID:
XP_062343060
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Position
20:11609440..11617433
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AA seq
485 aa
AA seq
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MECCEVEPRYTIEQIDLLQRLRLSGMTKPQIIHALESLERLEPDPRPPYFDPHTAPSNTT
PTPAPAPAPSSSSSLSSSSSLSLASATTQTPGLDGASLSPSNSYEASPPPQYPPGVGVQR
SFSYDILGEEDWDLEEKVEEYMRRDSNLVKEEIKTFLNNRRISQAIVGQVTGISQSYISQ
WLLQQGLEMSDTKRRAFYRWYLLERNSPGLRCSESQHGQGPVARARGGDRDGTGAAAGAA
GAGAIAAGVSSTPWGRQRELLMHLLPWYTAAAAAAQAQTQAQAQAQTQPGATLSMRSLVK
EEPDWRTAILPGERGGPLRLRRGSRFTWRKECQSIMESFFMENQYPDEAKREEIANACNS
VIQKPGCKLSEFERVTALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNGEE
AESQEFGEQVNPRFAEQDDLSSRKDIDHQDPTLLTAAEVVTLPSPAPQVLEQKADESKRE
TVDEE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttgtgaggtggagccacgctacaccatagaacagatcgatctcctacagcgc
cttcgtctctcagggatgaccaagccccagatcatccacgccttggagtccctggagcgc
ctggagccggacccccggcctccatactttgacccgcacaccgccccctccaacaccacc
cctaccccagccccagcccctgcgccctcctcctcctcttccctctcctcctcctcctcc
ctctctctggcctcagccaccacgcagacccctggcctggatggcgcctcgctgtctcct
agcaacagctacgaagcctcgcccccgccccagtacccaccgggggtcggagttcaaagg
tcgttcagttacgacatcctgggggaggaagactgggatctggaggagaaggtggaggag
tacatgaggagggacagtaacctggtgaaggaggagatcaaaaccttcctcaacaaccgc
aggatatcccaagccatcgtgggccaggtcacaggcatcagtcagagctacatatcccag
tggctgctgcagcagggcctggagatgagcgacaccaagcgcagggctttctaccgctgg
tatctgctggagaggaacagccctgggctgagatgcagtgaaagccagcacggccagggt
cccgtggccagggccaggggaggggacagagacgggacgggtgcggcggcgggcgcggcg
ggcgcaggggccatcgccgccggtgtctccagcacgccctggggcagacagagggagctg
ctgatgcacctgctcccatggtacactgctgcagcggcagccgcacaggcccagacccag
gcccaagcccaggcccagacccaaccaggtgccacgctgtctatgcgctctctggtgaag
gaggagcctgattggaggacggcgatcctacctggggaaaggggcgggcccctgaggttg
cgtcggggcagcaggtttacctggaggaaggagtgccagtcaatcatggagagtttcttc
atggagaatcagtatcctgatgaggcaaagagagaggagattgccaacgcctgcaactct
gtcatccaaaaacctggatgcaagctgtccgagtttgagcgggtgacggcgttgaaggtc
tacaactggttcgccaaccggcggaaggagatgaagagaagggccaacattgaggcggcc
atcttggaaagccacggcatcgaggttccgagtcccagctgtcactcaaacggggaagag
gcggagtcacaggagtttggggagcaggtgaacccccgattcgcagagcaggatgacttg
tcctccaggaaggacattgatcaccaagatccgactctgctaacagctgccgaggttgtg
accctgcctagccccgcccctcaggtcctggaacagaaagccgacgaatcgaaaagggag
acggtggatgaggagtga
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