Osmerus eperlanus (European smelt): 134040968
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Entry
134040968 CDS
T10927
Symbol
cthrc1a
Name
(RefSeq) collagen triple helix repeat-containing protein 1a
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oep03037
]
134040968 (cthrc1a)
Cilium and associated proteins [BR:
oep03037
]
Other cilia and associated proteins
Stereociliary proteins
134040968 (cthrc1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
134040968
NCBI-ProteinID:
XP_062343156
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Position
20:complement(2505523..2511444)
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AA seq
237 aa
AA seq
DB search
MDGTPASLLICLCLVIPLCAAEQPDKPDKPKHRHLRQRDAEFVDKYSTCVQGPAGVQGRD
GNPGVNGIPGTPGIPGRDGARGEKGECISERFEDPWRPNFKQCAWNSLNYGIDLGKIADC
TFTKRRTDSALRVLFTGSLRLKCKTACCQRWYFTFNGAECTAPLPIESIIYLDQGSPELN
STINIHRTSSVEGLCEGVHAGLVDVGIWVGTCADYPRGDASTGWNSVSRVIIEELPK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggacggcacaccggctagcctgctcatctgtctgtgcctggtcataccgctatgtgcc
gcggaacaaccggacaaaccggacaaaccgaagcatagacatctacgacagagagatgcc
gaatttgtcgataaatacagcacgtgtgtgcagggcccggctggtgtccagggccgtgat
ggtaacccaggcgttaatggcataccaggaaccccagggataccgggccgggacggggcc
aggggggagaagggggagtgcatcagcgaaaggtttgaagacccctggaggcccaacttc
aaacagtgcgcctggaactccctcaactacggcatcgacctgggcaagatcgctgactgc
accttcaccaagcggcgtaccgacagcgccctgcgagtcctcttcaccggctcgctgcgt
ctgaagtgtaagacggcgtgctgccagcgctggtacttcaccttcaacggggcagagtgc
accgcgcccctgcccatagagtccatcatctacctggaccagggcagccccgagctcaac
tccaccatcaacatacacaggacttcctcagtggaggggctgtgtgagggcgtgcacgcg
gggcttgtggacgtggggatctgggtcggcacgtgtgcagactatccccgtggcgacgct
tccacaggatggaactccgtgtcgcgtgtcatcatcgaggagctccccaaatga
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