Osmerus eperlanus (European smelt): 134041040
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Entry
134041040 CDS
T10927
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03013
Nucleocytoplasmic transport
oep03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134041040 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134041040 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134041040 (nup153)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134041040 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
134041040
NCBI-ProteinID:
XP_062343256
LinkDB
All DBs
Position
20:13435020..13453743
Genome browser
AA seq
1549 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQQQPGLISRVTDTVKSIVPSWLQKYFRNGEAAEG
GGAVPGAGQDQEQAPPSNGNEDMAPPLDGRDSPEPTTSNTEPSTSRASLNLHDHVLSRPP
LNRSHLHFPSLDSPSGHGAPGGSALFSQPSTSFAPPPFHASSSYSLVKEIKDSSSQHEDD
NISTTSGFSSRASDKDVPASKTASLPQLWSPETDRTHSGPHPAQSSLKKPAFNLSVFGAS
STSTMNSSVLSSSQLGDSPFYPGKTTYGGAAAARTGRSRLGTPYQAPVRRQMKAKPAGAQ
PCGVNSATARRILQSLERMSSPLADAKRIPSMATCPLNTSLDGTILERSHVLTKKRRLDS
PRPPVQKLVIPSAASYSANRSMSFRPSLTPRGLARPLTPRDTPSRQSPQIPETVAGPSQS
TSSLLYPLSSAPLSSAPLSSAPLSSAPLSSAPLSSAPLSNAPLSSTPVASAPGSGGGKMK
RERTSTRPSSKRPDDETADVPDLPAISLPISTSSLPTFSFSSLPPATTTAAPMTPVAAEL
VNNKDLPAACSPPCAPFTFSSPIVMATAASPTSFSPSAGFTFSAPVAKTAPSVSNGNMDG
HATSVRLSEMETVNYTILDVTEQAEEFEGPFKPAKALKQGSVLDLLKSPGFSSPVARLSP
SPEPSVPSPPAVSTAPSSSGFGDMFKPPAGSWNCSVCMVQNKPSDTKCVACQSPQPSTSS
SKTTPASGLQSTTAPVGFKGLFTTPAGTWDCDTCLVQNKPDVVKCVACETAKPGAGLKPS
PTLPAFSGAKALSNTSSTSSGFAGFGDKFKKPEGAWECGTCMVQNKAQDSKCVACMSAKP
GASSSPPPPSAAAPLLSFGDKFKKPEGSWECHVCMVQNKAADLQCVACQSAKPGATVEAK
AFGSSSFGVSSDSGSGGFKFGTSSESTSGAGFQFGGSLTDSSSSNASAGGFKFGASSSES
SSSGGFKFGGTLSDMSANNGGFKFGAGSSAAAASDDTQADPPSTGGFTFGASGGSASGNC
SSGNEENRKPSVGGFSFGLSKPESTFGFPAASQDRKENGSPSADSTSTEAAPLFGSRATA
EPSLTSTPLGGAAFGVPTSAENDLPAPSFTFGKPDEKEPFGFSGKEAESSQATSMGFSFS
KADTPQEPAQPSFTFGKPEDKSEAVVDGPKPAFSFGQSTTDAVASNPKPVFGFIASTSAP
SSTTPAPSLFGASITSAPSSTTPAPSLFGGSITSSSSTSAPSLFGAPITSAPAPSSTTPA
PGIFGASITSALAPSSTTPAASLFGVPITSAPSSSTPAPNLFGAPINSAAATSSFLFGQT
ATSEAPPAFMFGQSQDSQGSQVALPSLNAAPAQPFLFGSAAGAPPAAPPSFTFGAAAPPA
ASTPAAVPSSGPSPFVFSPAPSAGFGSTQSPAFGQVSSQPTAPAFGAPAPSPFLGATSSQ
SPAFGAASVFGSAASSAPGGGFQFGGASAFGSASGSTGVFAFGGGPGGSPAPPSTPSLVP
QPAAPGGGFTFAQPPAFNIGSTKNSFTPTPAGQNAIAGRKIKTAVRRRK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaattagaagcagaagatatcacatcgcctctaaacct
tacgccaaaagcaaacagcaacagcagccaggcctcatcagtcgagtcacagacacagtg
aagagcatcgttccttcctggttgcagaaatacttcaggaatggggaggctgcggagggg
ggaggggccgtgccaggggcggggcaggaccaggaacaggctcctccctctaacggcaat
gaggatatggcccctcctctcgatggtcgggactccccggagcccaccaccagtaacaca
gagccctcaacgagcagggcgtccctcaacctccacgaccacgtcctgtcccggcctccc
ctcaaccgctcccacctccacttcccctccctggactctccctcggggcatggagctccc
gggggctcggccctcttctcccagccctccacctccttcgccccgcctcccttccacgcc
tcctccagctactccctggtgaaggagatcaaggactccagctcgcagcacgaggacgac
aacatctccaccaccagcggcttctcctcccgcgcatcagataaagatgtcccggcctcc
aagacagcttccctcccccagctgtggtccccggagacggacaggacccactccgggccc
cacccggcccagtcaagcctgaagaagcctgccttcaacctgtctgtgttcggagcctcc
tccacttctacgatgaacagctctgtgctgagctccagccagctgggagactccccgttc
tatccaggcaaaaccacgtacggaggggcggcggcggccaggacggggcgctcacgcctg
gggacgccgtaccaggccccggtgaggaggcagatgaaggccaagccggcaggagcccag
ccgtgcggggtgaacagcgccacggctcgacggatcctgcagtccctggagcgcatgtcc
agccctctggctgatgctaagcggatcccttccatggccacctgtcctctgaacacatct
ctggacggcaccatcctggagcgatctcatgtgctgaccaagaagaggaggctggactct
ccgcgcccccctgttcagaagctggtcatcccctctgccgcctcgtattcagctaaccga
tccatgtccttcaggccctcgctgaccccgaggggcctggcacgacccctgaccccaaga
gacacgccctcaagacaatcacctcagataccagaaaccgttgcaggtccctctcaaagc
acaagcagcctgctctaccccctgtccagcgcccccctgtccagcgcccccctgtccagc
gcccccctgtccagcgcccccctgtccagcgcccccttgtccagcgcccccctgtccaac
gcccccttgtccagcacccctgtagccagcgccccaggctctggcgggggcaagatgaag
agggagaggaccagcactcgaccctcctccaagcgccccgatgacgagactgctgatgta
cctgacctaccagccatctctctaccaatcagcacttctagtcttcccaccttcagcttc
tcctcccttccccccgccacaaccacagccgcgcccatgactcctgtggctgccgaattg
gtcaacaacaaggatcttcctgccgcttgctcgcccccctgcgccccgttcaccttctcc
tcgcccatcgtcatggcgaccgccgccagccccacgtccttctcgccctccgccggattc
accttcagcgcacctgtagccaaaaccgctccctccgtgtccaacggcaacatggacggt
cacgcaacttctgtccgtctgtcggagatggaaacggtcaactacacgattcttgatgtt
acagagcaggcagaggagttcgagggtcccttcaaaccagccaaggccctgaagcagggc
agcgtgctggatctgctcaaatctcctggtttctcctctccggtggcaaggctgtccccc
agcccagagcccagtgtcccgtccccccctgctgtgtccacagccccctccagctccggg
ttcggggacatgttcaagccaccggcaggctcctggaactgcagtgtgtgcatggtgcag
aacaaacccagcgacaccaaatgtgtggcctgtcaatcaccacagcccagcacatcctcc
tctaaaacaacacctgcctcagggctgcagagtactacagctcccgtgggctttaagggc
ctcttcacaactcctgccgggacctgggactgcgacacgtgtctggtgcagaacaagccc
gatgtggtcaaatgtgtggcctgcgagaccgccaagcctggggctggacttaaaccctcc
ccgactctccctgctttctctggggccaaggctctgagcaacacctcctccacctcgtca
gggttcgccggattcggggacaagttcaaaaagccggagggggcgtgggaatgtggtacc
tgtatggttcagaacaaggcgcaagacagcaagtgtgtggcctgcatgagtgctaaacca
ggagcatcatcgtcccctccccccccctccgctgcagcccccctgctgagctttggggac
aagtttaagaagccagaagggagctgggagtgccatgtatgcatggtgcagaacaaggct
gctgacctccagtgtgtggcctgccagtcagccaagcctggggccacggtggaggccaaa
gccttcggttcgtcctctttcggcgtgtcgtctgattctggctctggagggttcaagttt
ggcacctcgtcagagtctacctctggtgccggcttccagtttggcggcagcctcacagac
tcctcgtccagcaacgcctcagccggaggattcaagtttggggcttcgtcctccgagtcc
tcttcctctggagggtttaagtttggaggcaccttgtcagatatgtctgccaacaacgga
ggattcaaattcggcgcgggctcctccgcggctgccgccagcgacgacacacaggcggac
cctcccagcacaggcgggttcacgtttggggccagcggggggtcggcgtcgggtaactgc
agctccggcaacgaggagaacagaaagccctcggtgggaggcttctcgttcggactctcg
aaaccagagtccacgttcggcttccccgcagcctcccaggacaggaaggagaacgggtcg
ccgtccgcagacagcacgtccaccgaggcggctccgctgttcgggagtcgagcaacggct
gagcccagcctgacctccacaccactggggggtgccgcctttggagtgccaacgtccgcc
gagaatgatctccctgctccctctttcacgttcgggaagcccgatgagaaggagccgttt
ggttttagcgggaaggaggcagagagctctcaagcgacatctatgggcttctccttcagt
aaagcggacactccccaggagccggcccagcccagcttcacctttgggaagccggaggat
aagagtgaggccgtcgtggacgggccaaagcctgccttcagctttggtcagagcactaca
gatgctgttgcctcaaaccccaaaccggtgtttggtttcatagccagcacctccgccccc
tcatccacaaccccggcccctagcctctttggggcctccatcacctctgctccctcatcc
accaccccagcccctagcctctttgggggttccataacctcctcttcctccacctcggcc
cctagcctttttggggccccaatcacctccgcccctgccccctcatccaccaccccggcc
ccaggtatttttggggcctccatcacctccgccctggccccttcatccaccaccccggcc
gctagcctttttggggtccccataacctccgccccgtcctcctccaccccagcccctaac
ctctttggggcccccatcaactctgccgcagccaccagctccttcctctttggccagacc
gcaaccagcgaagcccccccagccttcatgtttgggcaaagccaggatagccagggctct
caggtagccctcccctccctgaacgcagcccccgctcagcccttcctgtttgggtctgca
gccggtgcccccccggctgctcccccctccttcaccttcggggccgcagcgccccctgct
gcctcaaccccagcagccgtcccctcgtcaggcccatccccctttgtcttcagccctgcc
ccctctgctgggtttggcagcacccagagccccgccttcggccaggtgtcgtctcagccc
accgccccggccttcggggcccccgccccctcccccttcctgggggccacctcctcccag
tcccccgcctttggtgctgcctccgtgttcggatcagcagccagctctgctccaggaggg
gggttccagttcggtggagccagtgccttcggctctgccagcggcagcacgggggtgttc
gctttcgggggaggaccaggggggtcacccgcccccccttctactccctcccttgtgccc
cagcccgcagccccaggaggggggttcacctttgcacagccccctgccttcaacattggg
tcaaccaagaacagcttcaccccgacccctgcgggccagaacgccatcgctggacgcaag
atcaaaacagctgtccgacgcaggaagtag
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integrated database retrieval system
