Olea europaea var. sylvestris (wild olive): 10446185
Help
Entry
10446185 CDS
T05244
Symbol
rpoC2, OleuseuP_p011
Name
(RefSeq) RNA polymerase beta'' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
10446185 (rpoC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
10446185 (rpoC2)
03400 DNA repair and recombination proteins [BR:
oeu03400
]
10446185 (rpoC2)
Enzymes [BR:
oeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
10446185 (rpoC2)
Transcription machinery [BR:
oeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
10446185 (rpoC2)
DNA repair and recombination proteins [BR:
oeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
10446185 (rpoC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Peptidase_M23
Motif
Other DBs
NCBI-GeneID:
10446185
NCBI-ProteinID:
YP_004376411
UniProt:
F4MKN6
LinkDB
All DBs
Position
Pltd:complement(17641..21825)
Genome browser
AA seq
1394 aa
AA seq
DB search
MEVLMAERANLVFHNKVIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFHQATATSIS
LGIDDLLTIPSKRWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMN
PNFRMTDPFNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLT
EYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTTRGISVSPRNGMMP
ERIFIQTLMGRVLADDIYTGTRCIASRNQDIGIGLVNRFITFRAQPISIRTPFTCRSASW
ICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPS
NGKIKFNEDLVHPTRTRHGHPAFLCSIDLYVTIESEDILHNVNIPSKSFLLVQNDQYVES
EQVIAEIRAGTSTLNFKEKVRKHIYSDSDGEMHWSTDVYHPPEFTYGNVHLLPKTSHLWI
LLGGPCRSSLVSLSLHKDQDQINAHSRSVKRRYTSNLSETNDPERQKLFSSYFYGKKKKE
DRISDYSDLNRIRCNGRCNLIYPTILHQNSDLFSKRRRNRFIIPLQSIQERENELMPRSG
ISIEIPPNGIFRRNSILAYFDDPRYRRKSSGITKYGTIEMHSIVKKEDLIEYRGVKAFRP
KYQMKVDRFFFIPEEVHILPGSSSIMVRNNSLIGVDTQITLNIRSRVGGFVRVERKKKRI
ELKIFSGDIHFPGETDKISRHSGVLIPPGTGKLNSKESKKWKNWIYVQRITPSKKKYFVL
VRLVVTYEITDGINLATLFPPDLLQERDSVQLRVVNYILYGNGKPIRGISDTDIQLVRTC
LVLNWDQDKKKSSSSEEARASFVEIRTNGLIRHFLRIDLVKSPISYIGKRNDPSGSGLLS
DNGSDCTNINPFSSIYSKARIQQSLNQNQGTIHTLLNRNTGFQSLIILSSSNCFRMGPFN
DVIKYHNVIKESIQITKDPRIPIKNSLGPFGTAFPIVNFYSFYHLITHNQILVNNYLQLD
NLKQTFQVIKYYLMDENEKIYNPEPGSNIILNPFNLNWYFLHHNYCQETSTIISLGQFIC
ENVCIAKNAPHLKSGQVILVQVDSVVIRSAKPYLATPGATVHGHYGEILYEGDTLITFIY
EKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNERITRILGMPWGFLIGAELTI
VQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRA
ERMGRALEEAVCYRAVLLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKE
NVVLGGMIPLGTGFKGLVPPSKQDNNSLLETKKKNLFEGEMRDILFHHRKLFDSCLSKNF
HDTSEQSFIGFNDS
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacttatggcagaacgggccaatctggtatttcacaataaagtgatagatgga
actgccatgaaacgacttattagtagattaatagatcacttcggaatggcatatacatca
cacatcctggatcaagtaaagactctgggtttccaccaagctactgctacatccatttca
ttaggaattgatgatcttttaacaataccttctaagcgatggctagttcaagatgctgaa
caacaaagtttgattttggaaaaacaccatcattatgggaatgtacacgcggtagaaaaa
ttacgccaatccattgaaatatggtatgctacaagtgaatatttgcgacaagaaatgaat
cctaattttaggatgactgacccctttaatccagttcatctaatgtctttttcgggagct
agaggaaatgcatctcaggtacatcaattagtaggtatgagaggcttaatgtcggaccct
caaggacaaatgattgatttacccattcaaagcaatttacgcgaaggactctctttaaca
gaatatatcatttcttgctacggagcccgtaaaggggttgtggatactgctgtacgaaca
tccgatgctggatatctcacgcgcagacttgttgaagtagttcaacacattgttgtacgt
cggacagattgtggcaccacccggggtatttctgtgagtcctcggaatgggatgatgccg
gaaaggatttttatccaaacattaatgggtcgtgtattagcagatgatatatatacgggc
acacgatgtattgccagtagaaatcaagacattgggattggacttgtaaatcgattcata
acctttcgagcacaaccaatatctattcgaactccctttacttgtaggagtgcgtcttgg
atctgtcgattatgttatggtcggagtcctactcatggcgacctggttgaattaggagaa
gctgtaggtattattgcaggacaatcgattggagaaccgggtactcaattaacattaaga
acttttcataccggcggagtattcacggggggtactgcagaacatgtgcgggccccttct
aatggaaaaatcaaattcaatgaggatttggttcatccgacacgtacacgtcatggacat
cctgcctttctatgttctatagacttgtatgtaactattgagagtgaagatattctacat
aatgtaaatattccatccaaaagttttcttttagttcaaaacgatcaatatgtagaatca
gaacaagtgattgctgagattcgtgcaggaacatccactttgaattttaaagagaaggtt
cgaaaacatatttattctgactcagacggagaaatgcactggagtactgatgtgtatcat
ccacctgaatttacatatggtaatgttcatctattaccaaaaacaagtcatttatggata
ttattaggagggccgtgcagatctagtctagtctcactttcgctccacaaggatcaagat
caaataaacgcgcattctcgttctgtcaagcgaagatatacttctaacctctcagaaact
aatgatccggagagacaaaaactctttagttcgtatttttatggtaaaaaaaaaaaagaa
gataggatttctgattattcggaccttaaccgaattagatgtaatggtcgttgtaatctc
atatatccgaccattctccaccagaattctgatttattctcaaagaggcggagaaataga
ttcatcattccactccaatcgattcaagaacgtgagaacgaactaatgccccgttcaggt
atctcgattgaaatccccccaaatggcattttccgtagaaatagtattcttgcttatttt
gatgatcctcgatacagaagaaagagttcgggcattactaaatatgggactatagaaatg
cattcaatcgtcaaaaaagaggatttgattgagtatcgaggagtcaaggcatttaggcca
aaataccaaatgaaagtagatcggtttttttttattcccgaggaagtgcatatcttaccc
ggatcttcttccataatggtacggaacaatagtctcattggggtagatacacaaattact
ttaaatataagaagccgagtaggcgggtttgtccgagtggagagaaaaaaaaaaagaatt
gaacttaaaatcttttctggagatatccattttcctggagagaccgataagatatctcga
catagcggcgttttgataccaccaggaacaggaaaactaaattccaaggaatccaaaaaa
tggaaaaattggatctatgttcaacggatcacacctagtaagaaaaagtattttgttttg
gttcgacttgtcgtcacatatgaaataacggacggtataaatttagcaacactttttccc
ccggatctgttgcaggaaagggatagtgtgcaacttcgagttgtcaattatatcctttat
ggaaatggcaaaccaattcgaggaatttctgatacagatattcaattagttcggacttgt
ttagtattgaattgggaccaagacaaaaaaaaaagttcttctagtgaagaagcccgtgct
tcctttgttgaaataaggacaaatggtttgattcgacatttcctaagaatcgacttagtg
aaatcccctatttcatatatcggaaaaaggaatgatccatcgggttcaggattgctctct
gataatggatcagattgcaccaatatcaatccgttttcttccatttattccaaggcaaga
attcaacaatcccttaaccaaaatcaaggaactattcatacgttgttgaatagaaatacg
ggattccaatcgttgataattttgtcatcatccaattgttttcgaatgggtccattcaat
gatgtaataaaatatcacaatgtgataaaagaatcaattcaaattacaaaggatcctcga
attccaattaagaattcgctggggccttttggaacagcctttccaattgtgaatttttat
tcattttaccatttaataactcataatcagatcttggtaaataactatttgcaacttgac
aatttaaaacagacttttcaagtaattaaatattatttaatggatgaaaatgagaaaatt
tataaccccgagccaggcagtaacattattttgaatccattcaatttgaattggtatttt
ctccatcacaattattgtcaagaaacatctacaataattagtcttggacagtttatttgt
gaaaatgtatgtatagccaaaaatgcaccacacctaaaatcgggtcaagttatacttgtt
caagttgattctgtagtaatacgatcagctaagccttatttggccactccaggagcaact
gttcatggccattatggggaaatcctgtacgaaggagatacattaattacatttatatat
gaaaaatcgagatctggtgatataacccaggggcttccaaaagtggaacaggtgttagaa
gtgcgttcgattgattcaatatcgatgaatctagaaaagagggttgagggttggaacgaa
cgtataacaagaattcttggaatgccgtggggcttcttgattggtgctgagctaactata
gtgcaaagtcgtatctctttggttaataagatccaaaaggtttatcgatcccagggggtg
cagattcataataggcatatagaaattattgtacgccaaataacatcaaaagtgttggtt
tcagaagatggaatgtctaatgttttttcacccggagaattaattggattattgcgagcg
gaacgaatggggcgcgctttggaagaagcggtctgttaccgagccgtcttattgggaata
acaagagcatctctcaatactcaaagtttcatatctgaagcgagttttcaagaaactgct
cgagttttagcaaaagcagctctccggggtcggatcgattggttgaaaggcctgaaagag
aacgttgttttggggggtatgataccccttggtaccggatttaaaggattagtgcccccc
tcaaaacaagataacaacagtcttttggaaacaaaaaaaaaaaatctattcgagggggaa
atgagagatattttgtttcaccacagaaaattatttgattcttgtctttcaaagaatttc
catgatacatcagaacaatcatttataggatttaatgattcctaa
DBGET
integrated database retrieval system
