Olea europaea var. sylvestris (wild olive): 111365884
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Entry
111365884 CDS
T05244
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111365884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111365884
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111365884
mRNA cycle factors
Common to processing body (P body) and stress granule
111365884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
111365884
NCBI-ProteinID:
XP_022842174
LinkDB
All DBs
Position
17:133901..142216
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AA seq
985 aa
AA seq
DB search
MDYDHSILMDNDKENSTREHVQRLFNKNVELENKRRKAAQARVPSDPNAWQQMRENYEAI
ILEDHAFSEQHDIEYALWQLHYRRIEELRAHLNAALASSGLAASQNGKGPTREGPTRGGP
DRVSKIRSQFKTFLSEATGFYHDLMLKIRAKYGLPLGYSSDDPENQISMSKDGNKSSELK
KGLISCHRCFIYLGDLARYKGLYAEGDSKAQAFAAASSYYLQASSLWPSSGNPHHQLAIL
ASYSNDELVSIYRYFRSLAVENPFVTARDNLIIVFEKNRQSYTQLLGDAKATSVKTVSSQ
MPGKGRGKGETRPSIKDDKVDSSAVKERVFTASEVFKAFSIRFVRLNGILFTRTSLETFA
EVFSMVKNDLLELLSCGPDEKCNFGSDAAECRLAIVRLVAILIFSVHNVKRENENQSYAD
ILQRSVLLQNSFTAIFEFMACMLERCNQLTDPSSSYLLPGIMVFVEWLACCHDVAVGNEM
EEKQVNARSVFWKYCITFFNKLVSNSHMFLNEDKDETCFSNMSKYDESETANRLALPEDF
ELRGFLPLLHAQLILDFSRKSSFGIDGSSKEKQIRIQRIFAAGKALANVVQIGQEGFYFD
AKLKKFVTGVEPQISDDHALIGSFEVPKFNGNTQGNSVGSQMSLGAMQPEPHVSMEGEDE
NEVIVFKPSVTEKQVNDFASNMTSVVASGVDKFDFGNENGSFHESFLWHNGLSTGMKPPA
TIANSAAHYLRPVQPSTPQWLVEQAPVNGFSHLNLMENRPAMKSHLQDHLRVSQAAAVSV
PYPPFINPDAGDCYPIQTPQTALSSKFDSIISSGAAADSLYVKPSLAGSAGLKKNPVSRP
VRHVGPPPGFGSMPSKFVDESTNSVSLKNENPPVPQMDDYSWLDGYQLSSSNQSLGFNHS
INNSGLMFGSVSNNNNSSMGMSSFPFPGKQVSTLQIQGEKQDHQFSEHMKVYQEQQQQLQ
RGDKKSVALPQQYQGQPLWEGHFFV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggattatgaccattccattctgatggataatgataaagaaaattcaacaagggagcat
gttcagcgtctcttcaacaagaatgttgagttggagaacaagcgtaggaaagcagcacaa
gccagagttccgtcagacccaaatgcgtggcaacagatgcgtgaaaattatgaagccatt
atactggaagaccatgctttctctgaacaacacgacatagagtatgctttgtggcagttg
cattacaggaggattgaggagctacgggctcacttgaatgccgctctagcttcttcagga
ttagctgcttctcagaatgggaaaggtccaactcgagaaggtccaactcgagggggacct
gatcgggtttcaaagatccgttcccagtttaagactttcctttcggaggccactggattt
tatcatgatttaatgttgaagataagggcgaagtatggtctgccactgggatattcttct
gatgacccagagaatcagatttccatgtctaaagatggaaataaatcttctgagttgaaa
aagggcttgatatcctgtcatcgttgttttatttatctgggggatcttgctcgttacaaa
ggcttatatgcggaaggtgattctaaagctcaggcttttgcagcagcatcaagttactac
ttgcaagcttcttcactttggccttcaagtggtaatcctcatcatcagcttgctatactg
gcatcatattctaatgacgagctggtttcgatctatcgttattttcgaagtctggcagtg
gaaaacccattcgtcactgcacgggataacttgatcattgtatttgagaagaatcgacag
agttatacccaactacttggtgatgctaaagctacttcagtcaagactgtatcttcccag
atgcctgggaaagggagaggcaaaggtgaaactaggccttctattaaggatgataaggtg
gattcaagtgcagtcaaggaacgtgtatttactgcatctgaagtcttcaaagccttcagc
attcgatttgttcgactgaatggcattctttttacacgtacaagcttggaaacttttgcg
gaagtcttctcaatggttaaaaatgatttgttggaactcctttcctgtgggccagatgag
aaatgcaacttcggctcggatgctgctgagtgtagacttgcaattgtcaggctggtggcc
atcctcattttcagtgttcacaatgtaaaaagggaaaacgaaaatcagtcatatgctgat
attctacagcgctcagttctgcttcaaaattcatttactgctatttttgaatttatggcc
tgcatgcttgaaagatgtaaccagctaacagatccctcatcgagctacttattacctggg
attatggtttttgtggagtggttagcctgttgtcatgatgttgcagtaggcaatgagatg
gaggagaaacaagtgaatgccaggtctgttttctggaagtactgcattaccttcttcaat
aagcttgtatcaaacagtcatatgtttcttaatgaagataaagatgaaacatgtttctcc
aatatgagcaaatatgatgaaagtgagactgctaaccgtcttgcattgcctgaggacttc
gaattgagaggatttcttcctcttcttcatgcccaactcatccttgacttctcaaggaaa
tcttcttttggaattgatggtagcagtaaggagaagcaaatccgcatccagaggattttt
gcagctggaaaggctcttgctaatgtcgtccagattgggcaggagggattttattttgat
gcaaagttgaagaaatttgtaactggtgttgaacctcaaatttctgatgatcatgccctc
attggttcttttgaagttccaaaatttaatggtaacacacaaggaaattcggtcgggtct
caaatgtctctgggtgctatgcagccagagccacatgttagtatggaaggagaggatgag
aatgaggtgatcgtgttcaagccatctgtaactgagaagcaagtaaacgactttgcttca
aatatgacttctgtggttgcttctggtgtggacaaatttgattttggaaatgaaaatgga
tcatttcatgaaagtttcctctggcataatggtttaagcaccggcatgaagccacctgca
actattgctaacagcgctgcccactatctgcgtccagttcaacccagcactccacagtgg
ctggtagaacaagctcctgtaaatggattttcccacttgaatttaatggaaaatagacct
gccatgaaatctcatctgcaagatcatttaagagtttctcaggctgctgccgtttctgtt
ccctatccaccttttatcaatcctgatgcaggtgattgttatcccattcagacccctcag
actgctttatcatcgaagtttgattccattatttcttcaggagcagctgctgacagtctg
tatgtgaaaccatctttggccgggtccgcaggcttgaagaaaaatcccgtgagtcgacct
gttaggcatgttggtcctccacctggcttcggttccatgccttccaaatttgtggatgag
tcaacgaatagtgtgagcttgaaaaatgaaaatcctccagttcctcaaatggatgattat
agctggctagatggatatcagttgtcctcgtcaaatcaaagtcttggatttaaccattcc
attaataattcagggctgatgttcggttcagtgagcaacaataataatagttcaatgggg
atgtcaagcttccctttccctggaaagcaagtatccacactgcaaatccagggtgaaaag
caggaccatcagttttctgaacatatgaaggtgtatcaggagcagcagcagcaacttcag
agaggagacaaaaaatctgttgcactgcctcagcagtatcaaggacaacctctctgggaa
ggtcatttctttgtgtga
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