Olea europaea var. sylvestris (wild olive): 111365900
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Entry
111365900 CDS
T05244
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oeu03009
]
111365900
03012 Translation factors [BR:
oeu03012
]
111365900
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111365900
5.6.2.5 RNA 5'-3' helicase
111365900
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Other ribosome biogenesis factors
111365900
Translation factors [BR:
oeu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111365900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
Viral_helicase1
DEAD
AAA_22
AAA_16
ResIII
RuvB_N
nSTAND3
AAA_25
AAA
UvrD-helicase
UvrD_C_2
ABC_tran
AAA_33
NPHP3_N
PIF1
PhoH
DnaB_C
AAA_7
ATPase
IstB_IS21
AAA_5
Cep3
Zot
SRP54
TsaE
Motif
Other DBs
NCBI-GeneID:
111365900
NCBI-ProteinID:
XP_022842217
LinkDB
All DBs
Position
17:complement(352072..359330)
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AA seq
648 aa
AA seq
DB search
MEKDKGKRKNKQSSNPITLEQFVSIMAPLIDMEKEAEISASMSSGRSLDTAQKKGSTILN
LKCVDAQVGLMGKSLLEFQSNKGDVLPPHKFGNHDVVVLKPNKADLGSPSLGQGVVYRIK
DSSITVAFDDVPEEGLNVPLRLEKVANEVTYRRMKDTLIQLSKGVQKGPAADLVPVLFGE
RRPTVSKHDIQFAPLNSNLDHSQKDAISKALSSKDLFLLHGPPGTGKTTTVVEIILQEVK
RGSKVLACAASNIAVDNIVERLVPYRVKLVRVGHPARLLPQVLDSALDAKVLRGDNSALA
NDIRKEMKTLNGKLLKVKDRNTKRDIRRELKTLSKEERKRQQLAVTDVMKNADVVLTTLT
GALSKKLEGLSFDLVIIDEAAQALEIACWIALLKGPRCILVGDHLQLPPTIQSVEAEKKG
LGKTLFERLADLYGDEVTSMLTVQYRMHELIMNWSSGELYDSKIKAHSSVAARTLYDIED
VKKTSSTEPTLLLVDTTGCDMDEKKDEEDSTLNEGEAAVTISHAKRLVDSGVHASDIGII
TPYAAQVVLLKMLRSNENKLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRR
MNVAVTRARRQCCLVCDTETVSSDKFLKRLVEYFEEHGEYLSASEYGV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggacaaaggaaagcgcaaaaataagcaatcttcaaatccaataaccctagaa
caattcgtctccattatggctcctttaatcgacatggaaaaagaagctgagatatcggct
tcaatgagctcggggaggagtttggatactgctcaaaagaagggatccactattcttaat
ttgaagtgtgtagatgctcaggtagggttgatgggcaagtctctgctggagtttcaatct
aataaaggggatgtgcttcctcctcacaagtttggtaatcatgatgttgtggttctgaaa
ccaaacaaggctgatttgggttccccttccctcggacagggtgttgtttatcgaataaag
gactcttctattactgttgcttttgatgatgtcccggaagagggtttgaatgttccatta
cgtcttgagaaagtggcaaatgaggtgacatatcgtcggatgaaagatactttgatacag
ttaagtaaaggtgtgcagaagggtcctgctgcagaccttgtacctgtcttgtttggagag
agacggccgacagtgtccaaacatgatatccagttcgcccctttaaattccaacctagat
cattcacagaaagatgccatttcaaaggccctgtcatccaaggacctctttttgctgcat
ggacctcctggaactggaaagactacaactgtggttgaaattatcttgcaagaagtaaaa
cgtggatcaaaagttcttgcttgtgcagcttcaaatattgcagtagataacatcgttgag
agactcgtgccttatagagtaaagctggtaagagtgggacatcctgcacgtttacttcct
caagtacttgacagcgctcttgatgccaaggttttacgtggggataatagtgctcttgca
aatgacatccgcaaggagatgaagacattgaatgggaaactgttaaaagtgaaagacaga
aatactaagagagatattagaagagagcttaagactctttccaaagaagaacgtaaaagg
cagcagctggctgtgacggatgtgatgaaaaatgcagatgtggtattgacaacgttgaca
ggtgcattgtctaagaaattggaaggcctttcgtttgatttggttattattgatgaagct
gcccaggcacttgaaatagcgtgctggattgctttattgaagggtccgagatgtatacta
gtcggtgatcacctccagcttcctccaactattcaaagtgttgaagctgagaagaaagga
ttaggaaaaaccctctttgaacgcctcgcggacttgtatggagatgaagtcacgtctatg
cttactgttcagtaccgcatgcatgaacttatcatgaactggtcgtccggtgaactctat
gacagtaagattaaagcccattctagtgttgccgcccgtacactatatgacattgaggat
gtaaagaagacatcttcaacagagccgacgcttcttctcgttgacacaactggttgtgac
atggacgagaagaaagatgaggaagatagcacattgaatgagggtgaagcggccgtcact
atttcacatgctaagagacttgtggacagtggagtccatgcttccgatataggtatcata
acaccttatgcagcacaggttgtgttactgaagatgttgcgaagcaatgaaaataagcta
aaagatgtggaaatctcaacagtcgatggcttccaaggccgagagaaggaagcaattatc
atttcaatggtgcggtcaaactcaaagaaagaggtgggatttttaagcgatcataggaga
atgaatgtcgctgtaacacgagcaaggagacaatgttgcctcgtctgcgacaccgagaca
gttagtagtgataaattcttaaagcgtttggtggagtacttcgaggaacacggcgaatat
ttgagtgcttcagagtatggcgtgtaa
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