Olea europaea var. sylvestris (wild olive): 111365969
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Entry
111365969 CDS
T05244
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111365969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111365969
Spliceosome [BR:
oeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111365969
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
PRP4
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SCAP
eIF2A
Beta-prop_Nup120_160
WD40_like
Motif
Other DBs
NCBI-GeneID:
111365969
NCBI-ProteinID:
XP_022842324
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Position
17:1482440..1486689
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AA seq
575 aa
AA seq
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MDVDEENTVSASVADSSTVGADDQNVVPAIDTISLQPVQPIVAPPITTPAVPSIAPLPAV
HLPVPRPLAPLPVRPPIVRPPLAQNGDPRTSDSDSDEDESGSGHAPAGESLEYEISEESR
IVRERQEKAMQELLIKRRAAALAVPTNDGAVRARLRRLGEPITLFGEKEMERRDRLRMLM
AKLDSEGQLERLMKAHEDEEAAATAPTEVEEDIQYPFYTEGSQALLEARKEIAKYSILKS
TLRLHRARRKQDDPDEDLDAEIDWTLKQAASLVLDCSEIGDDRPLSGCSFSHDGKMLATC
ALSGVAKLWSVPEVKKVYTLKGHTERATDVAFSPTGYHLATASADRTARLCNTEGSVQRT
FEGHLDRLARIAFHPSGKYLGTASYDKTWRLWDVETGEELLLQEGHSRSVYGLSFHRDGS
LAASCGLDSLARVWDLRSGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRK
RKSLYIIPAHSNLISQVKFEPQEGYFLVTSSYDMTAKVWSSRDFKPVKTLSGHESKVTSL
DVIGDGQCIATVSHDRTIKLWSSKDDEKEKTMDID
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgaggaaaatacagtctctgcttcagttgctgattcttccactgttggg
gctgatgatcaaaatgttgttccagctattgatacaatttctcttcaaccagttcaaccc
atagttgcaccccctatcacaaccccagctgtgccttccatcgctccattacctgctgtt
catcttccagtccctcggccattggcaccactccctgttcgccctccaattgtcaggcca
cctttggcgcagaatggagacccgaggactagtgactctgattcggatgaagatgagtcg
ggatctggtcatgctcctgcaggtgaatctctggaatacgagatctcagaagagagcaga
atagttagagaaaggcaggagaaagcaatgcaggaacttctgataaagcgtcgtgcagct
gctttggcagttcccaccaatgatggagctgttcgagctcgtctccgacggcttggtgaa
cctataactctttttggagaaaaagagatggagagacgggatcgattgcggatgctcatg
gcaaagctggactctgagggccagttggagaggctgatgaaagctcatgaggatgaagaa
gccgctgccactgcacctactgaggtggaagaagatatccagtatcccttttatacggaa
gggtcccaagcacttttagaggcccgcaaagagattgcaaagtattctattctgaagtca
acattacggctccatcgagcaagaaggaaacaagatgatccagatgaggatttggatgca
gagatagattggactctgaagcaagcagcaagtctggtcctagactgcagtgagattggc
gatgatcggcctctttctggatgctcattttcacatgatgggaagatgcttgctacttgt
gctctaagtggagttgcaaagttatggagcgtgcctgaagtaaagaaggtttatacatta
aagggtcacactgaacgagctacagatgttgcattctctcccacaggttaccatttggct
actgcatctgctgaccgaactgcaagattatgtaacacagaagggtctgttcagagaaca
tttgagggacatttggatcgtcttgctcgtattgccttccatccatcaggaaaatacttg
ggcacagctagctatgacaagacttggaggttatgggatgtagagactggtgaagagttg
cttctccaagaaggtcacagcaggagtgtatatggattatcttttcaccgtgatggctct
ttagcagcttcctgtggacttgactctcttgctcgtgtgtgggacctaaggtctgggaga
agtatacttgccctggaaggccatgttaagccagtacttggtgtcagtttttctcccaat
ggctatcatttggctactggtggtgaagacaacacttgccgcatatgggatttgaggaag
agaaaatctttatacataatacctgctcattctaaccttatatctcaggtcaaatttgaa
cctcaagagggatactttctggttacttcttcatatgatatgacagctaaggtgtggtca
tctagagattttaagcctgtaaagacactatctggtcatgaatcaaaggttacgtcactt
gatgttattggagatggacaatgcattgcaactgtttcacatgatcgtacgatcaagctt
tggtcaagcaaagatgatgagaaagagaagacaatggatattgattaa
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