Olea europaea var. sylvestris (wild olive): 111365995
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Entry
111365995 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111365995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111365995
03009 Ribosome biogenesis [BR:
oeu03009
]
111365995
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111365995
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111365995
Complex B
111365995
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111365995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Transformer
Motif
Other DBs
NCBI-GeneID:
111365995
NCBI-ProteinID:
XP_022842369
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All DBs
Position
17:complement(1999756..2008868)
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AA seq
1159 aa
AA seq
DB search
METPEAVTPATGPRYAPDDPTLPQPWKGLIDGSTNLLYYWNPETNVTQYEKPEALPPPLP
SGPPPPPTVSTPKMNPVPVVRSQQPDGVQGQQNLQMTQIQHLQGQQMSSSLQQQTQVAPP
AAQQKVAHTELQQGSQLGPSMQHQSHLSQQQFRPQLMQQPGQQMPPSVGQIPILPGQQGL
PQGHPQSTQQVPMQPVQQTSYQGMHQMPQGPQGQMYSGAQMGHPHGYPLTPQQNQYTYQQ
NMHPQGPPDSSQQAQHLMQGQQFSHQQEHKMGFPPRYDLEIQQGKQTGFSPVHIQQTGTL
SAQNLPANSIHAPHIGIQPSQTMQYDRSSVNVQQSGADLAVKSGGSRFQNETGHGVIHGQ
QQQNLPLVGSKMAYEENPIGRTGNDYSYNLNKDGRAMPQHPKLAALPMPRTQQESRMRDF
PPQNVAINLPGQSNSPAGPPMHASYGHATVNPPFPGNSLVRPPGMMGPSDAIPLSAAEIY
REQHEVTATGDNVPAPFMTFEATGFPPEILHEIHFAGFSAPTPIQAQTWPIALQNRDIVA
IAKTGSGKTLGYLIPAFIHLRRRQNNPLNGPTVLVLAPTRELATQIQDEAIKFGRSSRVS
CTCLYGGAPKGPQLKELDRGADFVVATPGRLNDILEMKRIDFRQVSLLVLDEADRMLDMG
FEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKSITQY
VEVVPEMQKQRRLEQILRSQERGSKAIIFCSTKKLCDQLARSLGRNFGAAAIHGDKNQGE
RDWVLNQFRTGKSPVLVATDVAARGLDIRDIRVVVNYDFPTGIEDYVHRIGRTGRAGATG
IAYTFFSEQDWKYAADLVKVLEGANQPVPPEVREIALRGGPGYGKDRGGVNRFDSVDGGA
RWDSGGRGGMRDGGFGGRGGMRDGFGGRGGGRDGGFGGRGGMRDGGFGARGGMRDGGFGG
RGGMRDGGFGGRGGVRDGGFSGARIGWDRNERGTRDQYHNLDVPGRGRGRGRGRFDNRRE
ISDRKRERSYSSSPERVRTWGYSRSRSRSSSRSRSRDRSYSRSRSWSRSRSRSRSRGRSR
SRSYDRYERRPPRKSKFDQMDVSVPNVSAPESGTSATYLSTQGKEFSGAEPLERVPLAAS
VNTGFPDAGSNPSNPATEP
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggaaactccagaggcagtgactcctgccactggacccagatatgcacctgatgacccc
actttgccgcaaccttggaaaggattaattgacggaagtacgaatcttttgtactactgg
aatcctgaaacaaatgttactcagtacgagaagccagaagctttaccaccacccttgcca
tcaggcccaccgccacctcctacagtttctacacccaagatgaatccagtacctgtagtt
agatcacagcaacctgatggtgttcaaggccagcaaaatctacaaatgacacagatccaa
catctacaagggcaacaaatgagttcatcgttacagcagcaaacacaagtagcaccccct
gctgctcaacagaaagtagcacatactgagctgcagcaggggtcgcaattgggaccttcc
atgcaacaccagagccatctatcacaacaacaatttaggccacaactaatgcaacagcca
ggtcagcaaatgccaccctcagtggggcaaatccctatattgccagggcagcaaggactt
ccacagggacatccacagtccacgcagcaagtacctatgcagccagtgcaacaaacatct
tatcagggtatgcatcaaatgccacaggggccgcaagggcagatgtattcaggtgctcaa
atgggtcatccacatggttacccacttactcctcaacagaatcagtacacgtatcagcag
aatatgcatccccaaggaccaccagattcctcgcaacaagctcaacatttaatgcagggg
caacagttttcccatcaacaagaacataaaatgggattcccgccaagatatgatcttgaa
attcagcaagggaagcaaactgggttttctccagtccacattcagcaaactgggacacta
tctgcacaaaacttacctgcaaattccattcatgcaccacatattggcattcagcctagt
caaactatgcagtatgatcgctcttctgtcaatgtgcagcagagtggagcagatttagct
gtcaagtcaggtggttctaggtttcaaaatgagacgggccacggtgtcattcatgggcag
cagcagcagaatctgccccttgtaggatcaaagatggcttacgaagaaaaccctattgga
agaactggaaatgattattcttacaaccttaataaggatggccgtgctatgcctcagcat
cccaagctagctgcactacctatgccaagaacccagcaggaatcgaggatgcgtgatttc
ccccctcaaaatgttgctattaatcttccagggcaatcaaatagtccagcaggacctcca
atgcatgccagctatggtcatgcaactgtcaacccaccatttccaggaaattctcttgtg
aggcctcctggaatgatgggaccctcagatgctattcctctctcagcagccgaaatttac
cgtgaacagcatgaagtaacagccacgggtgacaatgttcctgctccattcatgacgttt
gaagccactggctttccaccagagatactacatgagatacattttgctggtttctctgct
cccactccaattcaggcacagacatggcctattgctctacagaacagggacatagttgct
attgccaagacaggttctggtaaaacattgggatatctgatccctgcattcattcatctt
aggcgaaggcaaaataatcctcttaatggtccaactgtgttggttttggctccaactcgg
gaacttgccacccaaatccaagatgaagcaatcaagtttggccgatcatctagagtctct
tgcacatgcttgtatggtggtgctccaaagggccctcagttaaaagaactggatcgtgga
gcggattttgtggtggcaactcctgggcggctcaatgatattctcgaaatgaagagaatt
gattttaggcaggtttctcttcttgtgctcgatgaggctgatagaatgcttgacatggga
ttcgaacctcagattcgcaaaattgtcaatgaaatacctccaagaaggcaaaccctcatg
tacacagcaacatggcctaaagaagtgagaaaaatagcaagcgatctgcttgttaatcca
gtccaggtgaatattggcagcgttgacgaacttgctgctaataaatctatcacacagtat
gttgaagtagtccctgaaatgcagaagcaaagacgcttggaacaaattcttagatcccaa
gagcgtggttctaaagccattatattttgttcaactaaaaagttatgtgaccagctggca
cgtagcctaggacgtaattttggggctgctgcaattcatggagacaaaaatcaaggtgaa
agggactgggtactgaatcaattccgaacgggcaagtcccctgttctagttgccactgat
gttgctgctcggggccttgacataagagacataagggtagtggtcaactacgactttcca
actgggattgaagactatgttcaccgcattggaagaactgggagggctggtgctacgggt
attgcctatacattcttctcagagcaagactggaaatatgcagctgatcttgttaaagtc
ttggagggagccaaccaacctgtgcctcccgaggtgagagaaatagctttacgtggtggt
cctggttatggcaaagatcgaggtggagtaaaccgctttgattctgttgatggtggtgcg
cgttgggattctggtggtcgaggtggcatgagggacggtggctttggtggtcgtggtggg
atgagagatggcttcggtggacgtggtggggggagagatggtggcttcggtggacgtggt
gggatgagagatggtggcttcggtgcacggggtgggatgagagatggtggtttcggcgga
cggggtgggatgagagacggtggtttcggtggtcgtggtggggtgagagatggtggcttt
tctggtgctcggattggttgggacaggaatgaacgtggtacacgtgatcagtatcacaat
ttagacgtgccagggcgtggtaggggcagggggcggggacgatttgataacaggagagag
atttcagacaggaaaagagagagaagttacagctctagtcctgagagagttcgaacatgg
ggttatagccgaagccgtagccgtagctcaagcaggagccgcagcagggataggagttat
agcaggagccgtagctggtctcgcagccgtagtcgctctcgcagccgtggtcggtctcgc
agccgcagctatgatagatatgagaggaggccgccacgcaaatctaagtttgatcagatg
gatgtttcggtccctaatgtttcggctcctgaatctgggacatctgccacatatctgagc
acacaaggcaaggaattctctggagccgagccattggagcgggttcctttagctgccagt
gttaataccggcttccctgatgctggatctaaccctagcaatccagcaacggaaccgtaa
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integrated database retrieval system
