Olea europaea var. sylvestris (wild olive): 111366113
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Entry
111366113 CDS
T05244
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03013
Nucleocytoplasmic transport
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111366113
09122 Translation
03013 Nucleocytoplasmic transport
111366113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111366113
03041 Spliceosome [BR:
oeu03041
]
111366113
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111366113
Spliceosome [BR:
oeu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111366113
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_THOC3
WDR55
Beta-prop_WDR41
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_EML
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_ACSF4
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_Nup120_160
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
111366113
NCBI-ProteinID:
XP_022842539
LinkDB
All DBs
Position
17:4611245..4619475
Genome browser
AA seq
371 aa
AA seq
DB search
MGVEQIDCRNWDEEAYRDSILQEREALSQTIFRTVFAPTRNPNPNSDIIVTSSSDGFVSS
YSISSCLALGCGNVRGQNWLVAEPHCLIQGHNGPAYDVKFCGNDEDSLLLSCGDDGKIQG
WKWKEILECELPIQGVKLKPVLDLVNPQHKGPWGSLSPIPENNAIAVDSQGGSIYAAAGD
SCAYCWDVETSQIKMVFEGHSNYLHCVVARNSCNQVITGSEDGTARIWDCRSGNCIQVID
PGKDKTSKESVQCVSCIALDSSESWLVCGKGPSLSLWNLPVNECISRIRTNSSIQDVVFD
ENEILAVGAAPLLTRFDMKGDIRSQINCAPQSVFSVSLHPSGVTAVSGYGGLVDIISQFG
SHLCTFRGKSL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggagtggaacaaatcgactgcagaaactgggacgaagaagcttatagggattccatt
ttacaggaaagagaagcactttcccaaaccatattccgcaccgtcttcgccccgacccgt
aacccgaacccgaattcagacatcatcgtcacttcctcaagcgatggcttcgtctcatct
tactccatatcctcttgccttgcactgggttgtggaaatgtgagaggtcagaattggtta
gtggctgaaccccattgtttgattcaagggcacaatggacctgcttatgatgttaaattt
tgcggtaatgatgaggattcattgttattaagctgtggtgacgatggtaagatccaagga
tggaaatggaaagaaattttagaatgcgagttgcccattcaaggagtcaagttgaagcca
gtacttgatttggtcaatccacaacataaaggtccttggggttcactttctccaattcca
gaaaacaatgcaattgctgttgattctcagggtggatctatatatgcagctgctggtgat
tcttgtgcatattgctgggatgtggagacgtctcaaatcaagatggttttcgaggggcac
tcaaactatttacactgtgttgttgcccgcaattcttgcaatcaggtcataactggttca
gaagatggcacagctcgaatatgggactgcagaagtgggaattgtatccaagtaattgat
ccaggaaaggataagacctcaaaagaatctgttcaatgtgtcagttgcattgctcttgat
tcaagcgagagctggttggtttgtggaaagggcccatctttatcactatggaatcttcca
gttaatgaatgtatttcaaggatcagaacgaattcatcaatccaagacgtcgtatttgat
gagaatgaaattttggctgttggggcagcaccattgcttactcgatttgacatgaaagga
gatattcgatcacagataaattgtgctcctcaatcagtgttttccgtttctttgcatcct
tctggggttacagccgtgtctggttatggaggacttgtagatattatatctcagtttgga
agccacttgtgtacattccgtggcaaaagcctatag
DBGET
integrated database retrieval system
