KEGG   Olea europaea var. sylvestris (wild olive): 111367631
Entry
111367631         CDS       T05244                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111367631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111367631
   03041 Spliceosome [BR:oeu03041]
    111367631
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111367631
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111367631
Spliceosome [BR:oeu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111367631
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt Cut8 RRM_Rrp7 DUF4866
Other DBs
NCBI-GeneID: 111367631
NCBI-ProteinID: XP_022844376
LinkDB
Position
18:complement(17270464..17276097)
AA seq 474 aa
MAKTRVKKRKLANKSSTPTPTPTPTPTPKIDKKIKKKNKSKSKTQLSDSDSDSDSNRQTQ
LQSLLEAYSKDQLITLVIDLCLCQDSLFSVIKAAADKDISHRKIFVHGLGWNTTHDSLES
VLKSFGEIEDLNIVNDRATGKCKGYAFVTFKTRQSAKKLLENPRINISNRIASCQLASAG
PNAAPAPGTFTQPPSSTDYANRKIYITNVPVNANAQQLRGFFEKFGEIESGPTGLDPTTG
KFKGYAIFVFKTLDGAKRVLEEPYKVFEGQKLHCQKATEGKSKVGSGAASITTALQPVQP
LMQVAAASQQAQNLALLGQQAGFVNPLYGGGLTGNANLGGLLGGYYGMMGGQLPGLDLGA
YSGAGAGSGGSSGPILPGLGLGAYSGSGGLSGGMLQGLSLGAYSGAGAGSGGSSGAMLQG
LGLGAYSGAGAGSGGSSAAMLLGLQHVYPKLHSGQTSSLSKSQRTGGGGYSANL
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggcgaaaaccagagtgaagaaacgaaagctcgccaacaaatcttccactcccactccc
actcccactcccacgcccacacctaaaatcgacaaaaaaatcaagaaaaagaacaaatcc
aaatccaaaactcaattatccgactccgactctgactccgactccaaccggcaaacccag
ctccaatctctcctcgaggcctactccaaagaccaactcatcaccctcgtcatcgacctc
tgcttatgccaagactcccttttttccgttataaaagccgcggccgacaaggacatctcc
catcgcaaaatatttgtccacggcctcgggtggaatactactcacgactccctggagtcg
gttttgaaatcgtttggtgaaatcgaggatttgaacatcgtgaatgatcgagcaactgga
aagtgcaagggttatgcttttgtcactttcaaaacccggcaatccgcgaagaaattattg
gaaaaccctagaattaatattagcaatcgtatagcatcgtgccagctggcgtcagcgggt
cccaacgctgctccagctccaggaacatttacccagccgccgtcttctacggattatgcg
aacaggaagatttatataactaatgtgccggtgaatgcaaatgcacagcagttgagggga
ttttttgagaaatttggggaaattgagagtgggccaactggtttggatcccacaactggg
aaatttaaaggttatgcaattttcgtgttcaagactttggatggagctaaaagggtttta
gaggagccttataaggtatttgaagggcaaaaattgcactgccagaaggccaccgagggg
aagagtaaggtgggcagtggggcagcatcaataactaccgcactgcagccagtgcagccg
ctcatgcaggtggcagcagcctcccagcaggcacagaatttggcattattggggcagcag
gcgggatttgttaatccattgtatggtggtgggttgactgggaatgcaaatttgggtgga
ttgttgggaggatattatgggatgatgggaggtcagcttccggggttggatttaggtgct
tatagtggtgctggtgctggcagtggagggtcaagtggaccaatccttccggggttgggt
ttaggtgcttatagtggtagtgggggtttgagtggggggatgctgcaggggctgagtttg
ggtgcttatagtggtgcaggtgctggaagcggaggatcaagtggggcaatgttgcagggg
ctgggtctaggtgcttatagtggtgctggtgcaggtagtggaggatcaagtgcggcgatg
ctactgggattgcagcatgtgtacccaaaattgcacagtgggcagacttcgtccttgtcc
aagtctcaaaggacgggtggtggtggttactctgcgaacttgtga

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