Olea europaea var. sylvestris (wild olive): 111368888
Help
Entry
111368888 CDS
T05244
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111368888
Enzymes [BR:
oeu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111368888
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111368888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
Prok-RING_4
zf-RING_Vps41
zf-RING_16
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111368888
NCBI-ProteinID:
XP_022846149
LinkDB
All DBs
Position
19:complement(13146472..13152156)
Genome browser
AA seq
558 aa
AA seq
DB search
MGHQNTHYSGHSIDLETDQQGQGHLHPKPGLFNGSVAKFPQTSVHTVIPPPGNACNFNIH
HMPEHHDVALFYGMMQYNGVQHQDQHPHPSSNLDLVVGAPSRHYNPYMVPPSGIIDFPLP
MNYGAHDHLSLSGTQGIVGIPTDSFGRNIPYMDGVRGSFKRKNDEGLPVNYQYHNASAGS
SSSVAPTRPVGSDTIITGAASFLPPECATNDSTSMIESGPHRSVRNRPGMIRSESIMAQN
TGNLIQGNYVTQPVHLPGNPWLDVHFNANNGDSGTFAWNQTPTLPYMHANVNGGCPEAGN
IGFQGYQVTANSGSSHSFLPPPIPQGHLNLNHHPQPPMQGARGYNINLPLQVGTSSHRIT
TISSSNSGISPFQDTVEAGSTFLTPVPPMGFQLYQPHQREVMLDSNTRHQNLPHLRFLPE
DEVAMLEIPGYHEARDTIDHHRDMRLDTDHMSYEELLALGEQIGSVVTGLSEEAIRRDLK
VGTFASSATCSSVDRTTCVEQEINFCVICQTDYKEQERIGILDCGHEYHRHCIKKWLLMK
NSCPICKSTALTQAREDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggggcaccaaaacacacattattccggtcattcgattgatttggaaacagatcagcaa
ggccaaggccatctacatcctaagcctggactctttaatgggagtgttgcaaaatttcct
cagactagtgtgcatacagtgattcctcctcctggaaatgcttgtaattttaatatccac
catatgcctgaacatcatgatgttgcattattctatgggatgatgcagtacaacggtgtt
cagcatcaggatcagcatccccatccctcttccaatcttgatttggttgttggtgcacca
tctcgtcattacaatccgtatatggtgcctccatctggtattatagatttccctttgccc
atgaattatggggcacatgatcatttgtcactctcaggcactcagggaattgttggtatt
cctacagatagttttgggaggaacattccctacatggatggtgtcagaggttcattcaag
agaaagaatgatgaggggcttcctgtaaattaccagtatcataatgcttcagcaggatct
agttcttctgttgcccccacaaggccagttgggtctgatactattataacaggtgctgct
agttttctgccacctgagtgtgcaactaatgactccacatcaatgattgaaagcggtcct
cacagaagtgtgaggaacagacctggtatgattagatctgaatctataatggcacaaaac
actggtaatttgattcaaggaaattatgtcactcaacctgtacatttgcctggcaatcct
tggttggacgtgcatttcaatgctaacaatggtgatagtgggacttttgcctggaaccag
actcccactttaccttatatgcatgcaaatgtcaatggaggttgtcctgaagctgggaat
attggctttcaaggttatcaagtcacagccaacagcggaagttcccatagttttcttcca
cctcctattcctcaaggccatcttaatctgaatcatcatccacagccacctatgcaaggg
gcgagaggatataatatcaacttgcctttgcaagtagggacatcatcacacagaatcact
actattagttcttcaaatagtggcatcagtcctttccaggatactgtagaggcaggctca
acatttctaacacctgttccaccaatgggctttcagttgtaccagcctcatcaaagggaa
gtcatgcttgattcaaatacaaggcatcagaaccttcctcatttgagatttctaccagaa
gatgaagttgccatgctagagattcctggctatcatgaggccagagatactatcgatcat
cacagggatatgcgtttggatacagatcacatgtcttatgaggagcttctcgcattaggg
gaacaaattggtagtgttgtcactggattgtctgaagaagctattcgacgtgatttgaaa
gtaggaacttttgcctcatcagcaacttgttccagtgttgacaggacaacatgtgtggaa
caagaaatcaatttctgtgtaatatgccagactgattacaaggagcaagaaagaattgga
atcctcgactgtggacacgaatatcacaggcattgcataaagaagtggctgctgatgaag
aacagttgtcccatctgcaaatccacagcattgacccaagcgagggaggacttgtaa
DBGET
integrated database retrieval system
