Olea europaea var. sylvestris (wild olive): 111368949
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Entry
111368949 CDS
T05244
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111368949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111368949
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111368949
mRNA cycle factors
Common to processing body (P body) and stress granule
111368949
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
111368949
NCBI-ProteinID:
XP_022846209
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All DBs
Position
2:26957075..26965382
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AA seq
975 aa
AA seq
DB search
MDNDKEISAGERVLRLFDKNVELENKRKKAAQARVPSDPNAWQQMRENYEAIILEDHSFS
EQHDIEYALWQLHYRRIEELRAHLNAALASSGLAASQNGKGPTRGGPDRASKIRSQFKTF
LSEATGFYHDLMLKIRAKYGLPLGYSSDDPENQISMSEDGNKFSEVKKGLISCHRCFIYL
GDLARYKGLYGEGDSKARAFAAASSYYLQASSLWPSSGNPHHQLAILASYSNDELVSTYR
YFRSLAVDHPFVTARDNLIIVFEKNRQSYTQLLGDAKASSLKTVSSRMPGKGRGKGGTRP
SFKDDKVDSSAVKEHIFTVPEVFKAFSIRFVRLNGILFTRTSLETFEEVFSVVKNDLVEL
LSSGPDEKYNFGSDAAECRLAIVRMVAILIFTVHNVKGENENQSYADILQRSVLLQNSFT
AIFEFMACMLERCNQLTDPSSSYLLPGIMVFVEWLACCNDVAVGSEIEDKQVNARSVFWN
HCITFFNKLVSNGYLFLNEDKDETCFSNMSKYDESETVNRLALSEDFELRGFIPLLPAQL
ILDFSRKPSFGSDDSSKEKQIRIQRIFAAGKALSNVVQIGQEGFYFDAKLKKFVIGVEPQ
IIDDYALMGSFEVPKSNGNTQENSIGSQMALGSMQPVPHVSMEGEDEDEVIVFKPSVTEK
QMNNFDSTISEAASGAGKFDFGNENGSFSLGHDSFLWQNAISTGIKPPATIAQSSAHYFR
PVLPSTSQWLVEPAPVVNGFSHLNLMENRPAMKPHLQDLGVSQAAALSVPYPQFVNADAS
RSYPIQTSHIALSSKFDSTISSGAAADSLYVKPSLVMSAGLKKNPVSRPVRHVGPPPGFG
SVPSKVVDDSMNSMTLKIGNTPIPKMDDYSWLDGYQLSSSNQSFGFNHSINTSGQMFGSM
SKNNSSVGMSSFPFPGKQVSTLQIQGEKQQDHQFSEHMKVYQEQQQQQLKKEDQQSVALP
QQYQGQALWDGHFFV
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggataacgataaagaaatttcggcaggggagcgtgttctgcgtctcttcgacaagaat
gttgagttggagaacaagcgtaaaaaggcagcacaggcgagagtcccttcagaccctaat
gcatggcaacagatgcgtgaaaattatgaagccattatccttgaagaccattctttctct
gaacaacacgacatagagtatgctttgtggcagttgcattacaggaggattgaagaacta
cgggctcatttaaatgctgctctagcttcttcaggattagctgcttctcagaatgggaaa
ggtccaactcgagggggacctgatcgggcttcaaagatccgttcccagtttaagactttc
ctttcggaggccactggattttatcatgatttgatgttgaagataagggcgaagtatggt
ctgccattgggatattcttctgatgatccagagaatcaaatttccatgtctgaggatgga
aataaattttctgaggtgaaaaagggtttgatatcctgtcatcgctgttttatttatctg
ggggatcttgctcgttacaaaggcttatatggggaaggtgattctaaagctcgggctttt
gcagcagcatcaagttactacttgcaagcttcctcactttggccgtcaagtggtaatcct
catcatcagcttgctatactagcatcatattctaacgatgaactggtgtcgacctatcgc
tattttcgaagtttggcagttgaccaccctttcgtcactgcacgggataacttgatcatt
gtatttgagaagaatcggcagagttatacccaactacttggtgatgctaaagcttcttca
ctcaagactgtatcttccaggatgcctgggaaagggagaggtaaaggtggaacaaggcct
tcttttaaggatgataaggtggattcaagtgcagtcaaggaacacatttttactgtacct
gaagtcttcaaagccttcagcattcgtttcgttcgactaaatggcattctttttacacgt
acaagcttggaaacttttgaggaagtcttctcagtggttaaaaatgatttggtggaactt
ctatcttctgggccagatgagaaatacaactttggatcggatgctgctgagtgtagactt
gcaattgtcaggatggtggccatcctcattttcactgttcacaatgtaaaaggagaaaat
gaaaatcaatcatatgcggatattctacaacgctcagttctacttcaaaattcatttact
gctatctttgaatttatggcctgcatgcttgaaagatgtaaccagttaacagatccctcg
tcaagctatttattgcctgggatcatggtttttgtggagtggttagcctgttgtaatgat
gttgcagtaggcagtgagattgaggataaacaagtgaatgccaggtctgttttttggaat
cactgcattaccttcttcaataagcttgtatcaaatggatatttgtttcttaatgaagac
aaagatgaaacatgtttctccaatatgagcaagtatgatgaaagtgagactgtcaaccgt
cttgcgttgtctgaggactttgaattgagaggatttattcctcttcttccagctcaactc
atccttgacttctctaggaagccttcttttggaagtgatgatagcagcaaggagaaacaa
atccgcatccagaggatttttgcagctggaaaggctctttctaacgtcgtccagattggg
caggagggattttattttgatgcaaagttgaagaaatttgtaattggtgttgaacctcaa
attattgatgattatgcacttatgggttcttttgaggttccaaaatctaatggtaacaca
caagaaaattcaattgggtctcaaatggctctgggttctatgcagccagtgccacatgtt
agtatggaaggagaggacgaggatgaggtgatcgtgttcaagccttcagtaactgagaag
caaatgaacaactttgattcaacaatttctgaggctgcttctggtgcaggaaagtttgat
tttggaaatgaaaatggatcgttttccctaggacatgatagtttcctctggcagaatgcc
ataagcacaggcataaagccacctgcaactattgctcaaagctctgcccactattttcgt
ccagtcctacccagcacttcacagtggctggtagagccagctcctgttgtaaatggattt
tcccacttgaatttaatggaaaataggcctgctatgaaacctcatctgcaagatctagga
gtttctcaggctgctgccctttctgttccctatccccaatttgttaatgctgatgcaagt
cgtagttatcccattcagacctctcatattgctttatcatcgaagtttgattctaccatt
tcttcaggagcagctgctgacagtctgtacgtgaaaccatctttggtcatgtcagcaggc
ttgaagaaaaatccagtgagtagacctgttaggcatgttggtcctccacctggctttggt
tctgtgccttccaaagttgtggatgactcaatgaatagtatgaccttgaaaattggaaat
actccaattccaaaaatggatgattatagctggctagatggatatcagttgtcctcgtca
aatcaaagttttgggtttaaccattccattaatacttccgggcagatgtttggttcaatg
agtaagaacaatagttcagtggggatgtcaagcttccctttccctggaaagcaagtctcc
acactgcaaatccagggtgaaaagcagcaggaccatcagttttctgaacatatgaaggtg
tatcaggagcagcaacagcaacaacttaagaaagaagaccaacaatctgttgcactgcct
cagcagtatcaaggacaagctctctgggacggtcatttctttgtgtga
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