Olea europaea var. sylvestris (wild olive): 111369519
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Entry
111369519 CDS
T05244
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111369519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111369519
Spliceosome [BR:
oeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111369519
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
111369519
NCBI-ProteinID:
XP_022846833
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Position
20:complement(8092831..8098172)
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AA seq
420 aa
AA seq
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MAEIKSSGRPIDQLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYVTVTHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKTLWSWYEPYL
KDDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRTIVANLENMKLPTKHL
GVTGENTRGSEETARRPPSVKASLSVSFGQRAPHRATTRDSSPVRRTLPSSAYDREGDSR
RSPSVRRSQSRDLSDREYSDRDRGRERGEMDRDRDRDYSRDRDRDRGRDRYRDRDRERER
DRERGRDSDRGYDYDRRSRDSYRRDYERSSHDDDRYTREGSSRRSRSRSRSRSRSIHEWS
RLSPARDVNKERTSASSNLAKLKDLYGDVSNQKDDVGKDSGPNRPSGTEEVIRIGGSSWR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccgagataaagtcatccggaagaccaattgatcaattattggagaaagtcctatgc
atgaatatactttcttctgattactttcgggacctgttgagattgaaaacttatcatgaa
gtgatagatgagatttacgttaccgtcacacatgtggaaccatggatgaccggcaactgc
cggggtccttcaacggcattttgccttctatacaagttctttaccatgaaactcactgtc
aagcaaatgcatgggctactgaagcacccagattctccttatatcagagcgattggattt
ctctatttaagatatgttgccgatccaaagacattatggagttggtatgagccgtactta
aaagatgatgaggaattctctcctggttctaatggccgaatgaccacgatgggtgtttat
gtacgcgacttgcttcttggtcagtattattttgacacacttttcccccgcatcccagtt
cctgttatgcgaactattgtagccaatcttgaaaatatgaagctacctactaaacatctt
ggtgttactggtgagaacacccgtggatctgaggaaactgcccggaggccaccgtctgtc
aaagcttctctttctgtttccttcggtcaacgtgctcctcatcgtgcaactactagggat
tcatctcctgttcgccgtacgctgccgtcatctgcttatgatagggaaggtgattcaaga
cggtccccaagtgttcgtaggagccagagccgtgatttatctgatcgagaatattcagac
agggatagaggcagagaaagaggggagatggacagagacagggatagggattattcccga
gacagagatcgagatcgaggcagggacagatatagagacagagacagggaaagggagaga
gaccgagaacgtggaagagacagcgatcgggggtatgattatgatagaaggtccagagat
agctatagaagggattatgagaggagcagccatgatgatgatcggtacacaagagaaggt
agttctcgtcggagtcgaagccgtagcagaagcaggagtcgaagcatccacgaatggagt
cgtctgagtcctgctagagatgtaaacaaagaaaggacatccgcatccagtaatttggct
aagcttaaagatctatatggtgacgtgagcaaccaaaaagatgatgtaggcaaagatagt
ggacctaacaggcctagtggtactgaggaagtgatcagaattggtggttcctcttggagg
taa
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