Olea europaea var. sylvestris (wild olive): 111369824
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Entry
111369824 CDS
T05244
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111369824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111369824
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111369824
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_NXF1-5
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
111369824
NCBI-ProteinID:
XP_022847260
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Position
20:16135564..16139040
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AA seq
581 aa
AA seq
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MVYSFPEEVLEYVFAFLSSDKDRNAVSLVCKSWYEIERWCRRRVFIGNCYAVSPQIMIRR
FPEVRAVKIKGKPHFADFNLVPERWGAYVYPWISAMARSYPWLEEIKLKRMVVTDESLEL
ISKSFKNFKVLSLSSCEGFTTDGLSSIAANCRNLRELDLRESEVEDLSGHWLSHFPDNFT
SLVSLNMSCLGSEVSFSALERLISRCPNLKTLRLNRAVPVEKLASLLRRAPQLVEFGTGA
CSTEIRTDIFSNLVEAFSGCKHLESLSGFWDVVPAYLPAMYCVCSRITKLNLSYATVQSP
DLVELISQCSNLKCLWVLDYIEDAGLKALSSYCKDLQELRVFPSDPYSAEPNVSLTEQGL
VTVSAGCPKLQSVLYFCRQMSNAALIAIARNRPNLLRFRLCIIEPQAPDYLTLEPLDTGF
GAIVEHCKELRRLSLSGLLTDRVFEYIGTHAKKLEMLSLAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDRALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPNLNVEVIDERGPP
DSRPESISVEKLYVYRTVAGPRADKPDFVWTMDEDGALRFS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtgtactcgttcccggaggaggtgctggagtacgtgtttgcgttcttgagctccgac
aaggaccggaatgcggtttcattggtgtgcaaatcgtggtacgaaattgaaagatggtgt
cggaggcgagtttttatcgggaactgttacgcggtgagtccacagatcatgatccgccgg
ttcccggaggtgagggccgtgaagatcaaggggaagccgcattttgcggacttcaacttg
gtgccagagaggtggggtgcctatgtttacccatggatctcagctatggctaggtcttac
ccttggctcgaagaaatcaagctcaagcgcatggtggttacggatgagagcttggagctg
atctccaagtcgttcaagaattttaaggttttgtctctctcgtcatgcgaggggttcaca
actgatggactttcctccattgcagccaattgcaggaatcttagagaattagacctgagg
gagagtgaagtggaggacttgagtgggcattggcttagccatttcccagacaacttcacc
tcactggtgtcacttaacatgtcctgtttgggctctgaggtaagcttttcagctttggag
cgtctcatctcacggtgtcctaacctgaaaacacttaggctgaatcgtgcggttcccgtt
gagaagctcgcaagcctacttcgtcgtgccccccaattggttgagtttggtacaggtgcc
tgttcaactgaaattcgaactgatatcttctcaaacttggtggaagctttttcaggctgc
aagcatctcgaaagcttgtctgggttctgggatgtagttccagcttaccttccagcaatg
tattgtgtgtgctccagaataactaaactgaacttgagctatgctactgttcaaagtcct
gatcttgttgagctcattagccagtgttccaatctcaagtgtctatgggtgctggattac
attgaggatgctggtcttaaggccctttcatcatattgcaaagatctgcaggaacttagg
gtgtttccttcggacccttacagtgcagagccaaatgtatctttgactgaacaggggctt
gtcacagtttcggcaggatgccccaagctccagtcagtgctatacttctgccgtcagatg
tcaaatgccgcattgattgctattgcaaggaatcgtcctaacctactccgtttccgtcta
tgtattatcgaacctcaagctcctgattacctcacccttgaaccccttgatactggtttt
ggagccattgtagagcactgtaaagaactgcggcgcctttccctttctggtctcctcact
gatcgagtttttgaatacattgggactcatgctaagaaactagagatgctttctttagct
ttcgctggggatagcgacttgggcctccatcacgtcttgtcagggtgtgaaagcctccga
aaactggagatcagggactgtccatttggggacagggctctattggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcatcttgctctgtaagttatggagcttgtaaa
ctgctcggtcagaagatgcccaatctcaatgttgaagttatagacgagagaggacccccg
gattcaaggcctgaatccatttctgttgagaaactctacgtgtacaggacagtcgctgga
ccaagagctgataagcctgattttgtatggactatggatgaagatggagccttgaggttt
tcttga
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