Olea europaea var. sylvestris (wild olive): 111370136
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Entry
111370136 CDS
T05244
Name
(RefSeq) uncharacterized protein LOC111370136
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111370136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111370136
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111370136
mRNA degradation factors
5'-3' decay
Decapping complex
111370136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
111370136
NCBI-ProteinID:
XP_022847603
LinkDB
All DBs
Position
21:12728469..12732903
Genome browser
AA seq
726 aa
AA seq
DB search
MRNFLLYWPLPANGYHCYFWEIFFVLQLRAEPGTSRCDGVPFLLLVPEGSFPLLAYVLNC
CGRDQESDFPIWFDQHAFDAASTEESKRWSSQPYSSFISFMESKSLYRTSSHPERQRLRH
HHSIEANLVPNMPFTSYPPTDGRSQQASASSQSSHPNLAYRPGGHQMAAASSNISSFSNP
QLHANALSHGSLYGGNIPQVTHGQPVNSQLQNQWENQPSLYPVERPGPNKIFQQQQLPHQ
NGLMPPQLHSQPHRVQHPFQPSFFHLSGLLPQLHNPHISASPPLINNSEMLGLADMRDAR
AMSMLRISGWPKFKSKYMTADEIENIVRMQLATTHSNDPYIDDYYYQACLAKKSSGAKLK
HHFCPSYLRDKFSGACSNKEPHAFLQIDALGRLSFSSIRRPHPLLEVDSPNSSGSGNAEL
FENPLEQEPMLAARVTIEDGICLLLLVDDIDRFLQFNQLQDGGAQLRQRRRHILLEGLAL
SLQLIDPPGKNGHTVDLAPEDDLDLLRLVSLPKGRKFLSRYLQLLSPGDELTRVVCMALL
HHLRFLFGGLHDDPRASEPTINLARVVSSCVHSMERPALHPWFCSAEHPPLRPIGSLNRD
GASIVLKSLLERATELLTNPHAAANCCISNREFLQASFDAFFGLLTKYCFNKYDSVMKSF
LAQASLETATLGSDATRAISREMPVELLRASLPHTSEPQRKLLLEFTQRSMPMLGLRGQG
GGSGGS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagaaactttctgctttactggcctctgcctgccaacggttatcattgctacttctgg
gaaatcttcttcgttcttcaattgcgagcggagcctggcactagtaggtgcgatggcgta
ccctttcttcttttggttcctgaaggatcttttcctttgcttgcttatgttttgaattgt
tgtggtagagaccaagagtccgattttcccatttggtttgatcagcatgcttttgatgct
gcaagcactgaggaaagcaaaagatggtcatcacagccatattcttcctttatcagcttc
atggaatccaaatctttgtacagaacatcgtcacaccctgaacggcaacgcctacgacat
caccattctattgaagcgaatcttgttccaaatatgccgttcacttcatatcctcccaca
gatggcaggtcacagcaggcttcagcaagtagtcaatctagccaccctaatcttgcatat
cgcccaggtgggcaccaaatggcagctgcttcttccaatatttcttctttctctaatcct
cagcttcatgcgaatgccttatctcacgggtcactgtatggaggaaatattcctcaggta
actcatggccagccagttaatagtcaactccagaaccagtgggagaaccaacctagttta
tatcctgtagagcgtcctggcccaaacaagatttttcagcaacagcagttaccccatcaa
aatggtttaatgcctccacagctgcactcccagccacacagagttcagcatccgtttcag
ccatcctttttccatctatcggggttgctgcctcaacttcacaatcctcacatttctgca
tcaccgcctttgataaataactctgagatgcttggattagctgatatgagagatgcaagg
gctatgtcaatgctgagaattagtgggtggccaaagttcaagtccaagtacatgacagcc
gatgaaattgaaaacattgtgagaatgcagcttgctactactcatagcaatgatccttat
attgatgattattactatcaagcttgtctggccaaaaaatcttccggtgcaaagttgaaa
caccatttctgcccatcttatctgcgtgataaattttccggagcttgttctaacaaagag
ccacatgcttttctccagatcgatgctcttgggaggctttccttctcttcaatacgcagg
ccccatccacttcttgaagttgattccccaaattcatctggtagtggtaatgctgaactg
tttgagaaccctttggaacaggagccaatgcttgcggctagagtgaccattgaggatggc
atttgccttctccttcttgttgatgatattgatagattcctacaatttaatcagctccaa
gatggtggtgcccagttaaggcaaaggaggaggcacatcctgttagaaggtttggcatta
tcccttcagcttattgatcctcctgggaaaaatggccacacagtggacttggctcctgaa
gatgaccttgacctcttaaggttagtttctcttcctaagggccggaagttcctatcaagg
tatcttcaacttctttctccaggtgacgaactcactcgagtagtttgcatggccctttta
catcatttgagattcttgtttggtggccttcatgatgatcctagagcttctgaaccaact
atcaaccttgcaagagtcgtgtcatcttgtgtccacagtatggagaggcctgccttgcat
ccgtggttttgttcagctgagcatcctcctctgcgtcccattggaagcctcaatagagat
ggggcatctattgttctcaagtctcttctcgagagggcaactgagctcctgacaaaccct
catgctgcggccaactgctgcatttctaacagagaatttttgcaggcctcttttgatgca
ttctttggtctcctcacgaaatactgctttaataaatatgattctgttatgaaatccttc
ctcgcccaagcctcattagagacagctactcttgggtctgatgcaaccagagccatcagt
agagagatgccggttgagctcttacgagcaagtctccctcatacaagcgagcctcagaga
aaactgttattggaattcacacagcggtccatgcccatgttgggtcttaggggtcagggc
ggagggagtggtggctcttga
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