Olea europaea var. sylvestris (wild olive): 111370491
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Entry
111370491 CDS
T05244
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03420
Nucleotide excision repair
oeu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111370491
09124 Replication and repair
03420 Nucleotide excision repair
111370491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111370491
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111370491
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
111370491
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111370491
TCR (transcription coupled repair) factors
Cul4-CSA complex
111370491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
111370491
NCBI-ProteinID:
XP_022847978
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All DBs
Position
21:complement(6567793..6579690)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTNSCVGNFTGPQELNLIIAKCTRIEIHLLMPQGLQPMLDLPIYG
RIATLELFRPHGETQDLLFIATERYKFCVLQWDAEAAEVITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVVPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPKPTIVVL
YQDNKDARHVKTYEVSLKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHNGFLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVFVGSSSGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSATEDPYDTFLVVS
FISETRILAMNLEDELEETDIEGFSSQVQTLFCHDAIYDQLVQVTSNSVRLVRSNSRELR
NEWFAPAGYSVNVATANATQVLLAAGGGHLVYLEIGDGLLTEVKHAQLEYDISCLDINPI
SDSPNYSKLAAVGMWTDISVRIFSLPDLNLITTEHLGGEIIPRSLLLCSFDGISYLLCAL
GDGHLLNFVLNTSTCELMNRKKVSLGTQPITLRTFSSKNATHVFAASDRPTVIYSSNKKL
LYSNVNLKDVSHMCPFNSAAFPESLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICH
QEKTRTFALCSLQYNQPSAEDHEMHFIRLLDDQTFDFISTYPLDQFEWGCSILSCSFSDD
SNVYYCVGTAYVMPEENEPTKGRILVFVVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGSRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNSNWMTAVEILDDDIYLGAENSFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFINRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPYEQYIFLEKLQTILRKV
IKGVGGLSHEQWRSFYSEKKTVDAKNFLDGDLIESFLDLGRNRTEEISKAMGVPVEELMK
RVEELTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatggaactatgtggtgacggctcacaagccaactaacgtcacgaattcgtgc
gtcggtaatttcaccggtcctcaagagctcaatctcatcattgcgaaatgcacccgaata
gaaatccatttactcatgcctcaaggattacagcctatgttggatttgccaatatatgga
agaattgccacacttgagcttttccgcccgcatggggaaacacaagatcttcttttcatt
gctactgagagatataaattctgtgttctgcaatgggatgctgaggctgctgaggttatt
acaagagctatgggggatgtttcggacagaattggtcgtcctacagacaatggacagatt
ggcataattgatccagattgtagattgattgggcttcatttatatgatggattatttaag
gttgttccttttgacaacaaaggccagctcaaggaagcatttaacattaggcttgaggag
ctccaagttttagatatcaagtttctatatggctgcccaaagccaacaattgttgtgctt
taccaggataacaaggatgctcgtcatgtgaaaacatatgaggtctcgttgaaggataaa
gattttgttgagggtccatggtctcaaaacaaccttgataatggggcagatttgttaatc
ccagtacctcctcctctttgtggtgtcctaattattggagaagaaactattgtgtattgt
agtgcctctgcttttaaagcaattccaattagaccttctataacaagagcttacgggagg
gtcgatgctgatggttctcgctacttattaggggaccataatggatttcttcatctactt
gttataacacacgagaaggagaaagtaactggactcaaaattgagctattgggagaaaca
tctattgcatctacaatttcttatctcgataatgccgttgtgtttgttggctcaagttct
ggagattcacagctcataaagcttaatcttcaacctgatgcaaaaggttcttatgttgaa
gttctagaaaggtacgtcaatttggggccaattgttgacttttgtgtggttgacttggag
aggcaaggtcaaggtcaggttgtaacttgctctggagcctacaaagacggttctcttcgc
atcgtgcgaaatggaattgggataaatgaacaggcatcagtagaactacaaggaatcaaa
gggatgtggtcattgcgatcagctactgaagacccatatgacaccttcttggttgtaagc
tttattagtgagacacgtatcttggcaatgaatcttgaggatgaattggaggaaactgat
attgaaggtttttcttcacaagtccagactttgttttgccatgatgctatatatgatcaa
cttgtacaggttacttcaaactcagttagattggtcaggtcaaattctagagagcttcga
aatgaatggtttgctccggcagggtactcggtcaatgttgccacagctaatgccacccag
gttttattggctgctgggggtggccatttggtttatttggaaattggtgatggattgttg
actgaagtaaaacatgctcagttggagtatgacatctcgtgcctggacataaatcctatc
agtgatagtccaaactacagtaaactggcagcagttggaatgtggacagatataagtgtt
aggatattttcacttcctgacttaaatcttatcacgacagaacatttgggaggggagatc
attccgcgttccctgcttctatgttcttttgacgggatatcgtacttgttatgtgcactt
ggagatggacatctattgaattttgtgttgaacacaagtacttgtgagctgatgaatagg
aaaaaggtgtctcttgggacccaacctattacgcttcgtactttctcatcgaagaatgca
acgcatgtttttgctgcttctgataggcccactgttatctacagcagtaacaagaaatta
ctttacagcaatgtaaatctaaaagatgtgagtcatatgtgccccttcaactctgctgct
tttccagaaagccttgcaattgcaaaagaaggtgagctaacaattggcaccattgatgat
attcaaaagcttcacatacgcactattccacttggggagcatgcacgccgcatatgccat
caggagaaaacccggacctttgctctatgtagcttacagtataatcaaccaagcgcagaa
gatcatgaaatgcactttatccgcctgttggatgaccaaacttttgacttcatatccact
tacccactcgatcaatttgaatggggttgttcgattcttagctgctccttctctgatgat
agtaacgtttactactgcgttgggactgcatatgtaatgccagaagagaatgaacctacc
aagggccgaattttggtttttgtagtagaagatggaaaacttcagctcattgcagaaaag
gaaactaagggggctgtttactctcttaatgcctttaatgggaaactacttgccgcaatt
aatcagaagattcagttgtacaagtggatgcttcgtgatgatggctctcgtgagttgcaa
tctgaatgtggacatcatgggcacatacttgctctttatgtacaaacaagaggagatttt
attgttgtgggtgatctgatgaaatccatttctcttctaatttataagcatgaagagggt
gctatcgaggagcgagctcgtgactacaattcgaattggatgacagcagttgagattctg
gacgacgacatttaccttggtgctgagaatagtttcaacctcttcacagtccgtaaaaat
agcgaaggggctactgatgaggagcgaggacgtctcgaggtggttggcgaataccacctt
ggcgaattcatcaaccgattccgacatggttctcttgtcatgagattgccagattccgat
gttggccagattccaactgtcattttcggcaccgtcaacggtgttattggggtaattgct
tctcttccttatgagcagtatatcttcttggagaagctgcaaactattcttcggaaagtg
atcaagggtgtgggaggacttagtcatgaacagtggaggtctttttacagtgaaaagaaa
acggttgacgctaaaaacttcttggacggagatttaatagagtcgtttcttgatcttggc
cggaataggacggaagaaatctcgaaggcgatgggcgttcccgtggaggaattaatgaag
agggtagaggagttgactaggttacattaa
DBGET
integrated database retrieval system
