Olea europaea var. sylvestris (wild olive): 111370781
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Entry
111370781 CDS
T05244
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111370781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111370781
03036 Chromosome and associated proteins [BR:
oeu03036
]
111370781
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111370781
Coactivators
SAGA/TFTC/STAGA complex
111370781
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111370781
STAGA complex
111370781
TFTC complex
111370781
SAGA complex
111370781
SLIK complex
111370781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
TAF4
Motif
Other DBs
NCBI-GeneID:
111370781
NCBI-ProteinID:
XP_022848413
LinkDB
All DBs
Position
21:13722611..13729654
Genome browser
AA seq
541 aa
AA seq
DB search
MSIVPKETIEVIAQSIGITNLSPDVLPAIASDVEYRVREIMQEAIKCMRHSRRTTLTAVD
VDSALGLRNVEPVYGFASGDPLRFKRAAGHKDLFYIEDKDVEFKEVIEAPLPKAPLDTEV
VAHWLAIEGVQPAIPENPPPEVLAVPSDNGKTAYKEDGIPVDIKLPVKHVLSRELQLYFE
KITELTVSRSDSALFKEALVSLATDSGIHPLVPYFTFFVADEVSRNLNKFSLLFALMRLV
WSLLQNPHIHIEPYLHQLMPSVMTCLVAKRLGNKFSDNHWDLRNFTANLVASICKRFGHV
YHNLQPRVTRTLLHAFLDPSKALPQHYGAIQGLATLGPNVVRLLVLPNLDPYLRLLEPEM
QLEKQKNEVKRHEAWLVYGALMRAAGLCMYDRLKTLPSLLAPPARAVWKSNGKVITTTSK
KRKASMDNVMQQPPLKKLATESPMGVTLANSLPVDMPGSSSGYPTIIGTADSNLQSSRNE
NVPESSGRKEMVSGQGPSTSAALTQAWKDDVDVGHLLPSLYEYFGESMLSFVPSPAASFF
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagttccgaaagaaacaattgaagtgatagcacagagtataggcatcaccaat
ttgtcaccagatgttttacctgctattgcttccgatgtcgagtatcgcgttcgcgaaatt
atgcaggaagctatcaaatgcatgcggcattcgaggagaaccaccttaaccgccgtcgac
gtggacagtgcacttggcttaagaaacgttgagccagtatatggatttgcatcaggagat
ccgttgcggttcaaaagagctgctggacataaggatttgttctacattgaggataaagat
gtagagtttaaggaagtgattgaagctcctctaccaaaggcaccattagatacagaagtg
gttgctcattggttagctattgaaggagttcaacctgccattccagaaaatccacctcct
gaagtacttgcagtgccttctgataatggaaagactgcatacaaagaggatggaattcct
gtagacatcaaattacctgtaaagcatgttctttcccgtgagcttcagctttactttgag
aaaatcacagagcttactgttagtagatccgattctgccctctttaaagaagctctagtg
agcttggctactgactcaggcattcatcctttagttccttacttcacattttttgttgct
gatgaggtttctcggaatctgaataaattttctctcctttttgctttgatgcgtcttgtt
tggagccttcttcaaaatcctcacatacacattgagccctatttgcaccaattgatgcct
tctgtgatgacatgcctggttgcaaaaagactaggaaataagttctccgacaatcactgg
gatctcagaaacttcacggctaatctggttgcttcaatatgcaagagatttggtcacgtt
taccacaatctccagccacgtgtcaccaggacattgctgcatgctttcttggacccgtca
aaagcactccctcaacattatggcgcaattcaaggtctagcaacgcttggacctaatgtg
gttcgcctgcttgtgcttcccaatcttgatccttatttgcggcttctggagccagaaatg
caacttgagaagcagaagaatgaggtgaagaggcatgaagcctggcttgtatatggggcg
ttgatgcgtgcagctggcctgtgcatgtatgatcgtctgaagacgctcccctctctacta
gctccaccagcacgtgctgtctggaagagtaatggaaaagtcataacgacaacgtcaaag
aaacgcaaagccagcatggataatgtgatgcaacagccaccactcaagaaactagcaaca
gagagtcctatgggtgtaacactggcaaactcattgccagtcgacatgccaggatcgagc
agtggatacccaacaattattgggaccgcagactctaatttacaatcatcacgaaatgag
aatgtgcctgaaagcagtggcagaaaggagatggtcagtggtcaaggaccaagcacatca
gcagctcttactcaagcctggaaggacgatgtagatgttgggcatctgctgccttcgcta
tacgaatattttggtgaaagtatgttgtcctttgtaccctcgcctgcagcatctttcttc
ttgtga
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