Olea europaea var. sylvestris (wild olive): 111371680
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Entry
111371680 CDS
T05244
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
oeu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111371680
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111371680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111371680
04121 Ubiquitin system [BR:
oeu04121
]
111371680
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111371680
Enzymes [BR:
oeu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111371680
Spliceosome [BR:
oeu03041
]
Complex B
Other components
Prp19 complex
111371680
Complex C
Prp19-CDC5 complex
111371680
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
U-box type E3
111371680
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
111371680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR41
Beta-prop_Aladin
WDR90_beta-prop_4th
PROPPIN
Beta-prop_DCAF12
Beta-prop_DCAF4
zf-Nse
U-box
PAS_11
Beta-prop_VPS8
WDR54
NIT
Beta-prop_ACSF4
WD40_like
B_lectin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
111371680
NCBI-ProteinID:
XP_022849572
LinkDB
All DBs
Position
22:complement(9967407..9979956)
Genome browser
AA seq
525 aa
AA seq
DB search
MNCSISGEVPEEPVVSKKSGLLFEKRLIERHISDYGKCPITGEPLTLDDIVPIQTGKIVK
PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEAVALLAQAERQIPISVAAPNAVITAALSNGKRAAEEDEIGPDGKRIRPGISSNIIS
ELSDCNAALSQLRKKRQIPPTLASIDAVEKYTQLNSYPLHRTNKPGILSLDIQYSKDIIA
TAGVDTNAVVFDRTSGQIVSTLNGHSKKVTSVKFVAEGELVVTGSADKTVRLWQGSENGN
YDCRHILKDHTAEVQAVTVHATSNYFVTASLDSTWCFYEIASGLCLTQVEDTSGSSDGYT
AAAFHPDGLILGTGTSGALVKIWDVKSQTNVARFDGHVGAVTAISFSENGYFLATAAQDG
VKLWDLRKLKNFRTFTPYDENTPTQSVEFDHSGSYLALGGSDIRVYQVATVKTEWNCIKT
FPDLSGTGKATSVKFGPDAKYIAVGSMDRNLRIFGLPEEDGSLES
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaattgttcaatttccggtgaggtgccggaggaacctgtagtctccaagaagtctggt
ctcctctttgagaagcgcttgattgagcgacacatctcggattatggaaaatgtccaatt
actggggaacccctaaccttggatgacattgtcccaatccaaactgggaagatagtgaag
ccccgaccagtacaggctgcaagtattcccgggatgttgggaatgtttcaaattgaatgg
gatggtttgatgctatccaattttgcattagagcaacaattacatactgctaggcaagag
ctcagtcatgccttatatcagcatgatgctgcatgtcgtgttattgcaaggctaaagaag
gaaagggacgaggcggtggcattactagcacaggcagaaagacagatacccatttcagta
gcagctccaaatgcagttattactgctgccttaagcaatgggaaaagagctgcggaggaa
gatgagattggtcctgatgggaaaagaatccgtcctggaatatcaagtaatatcatttct
gagctttcagactgtaatgctgctctttcacagctaaggaaaaagcgacagataccccca
acattggcatcaattgatgctgtggagaaatatactcagcttaatagttatcctctgcat
cggacaaacaaacctggcatattatctttggacatccagtattccaaggacattattgcg
actgctggagttgacacgaatgctgtagtctttgatcgcacttcagggcagatagtatct
acgcttaatggtcattcaaagaaggtaacaagtgtgaaatttgtggctgaaggtgaatta
gtagttactggatctgctgacaagacagttcgtttgtggcaaggaagcgaaaatggaaat
tatgattgtaggcatattttgaaggatcatactgcagaggtgcaagcagttacagtccat
gctacatctaactacttcgtgactgcatctcttgacagcacatggtgcttctacgaaata
gcttctggtttatgcctcactcaggttgaagacacttccggttcttctgatggttacaca
gctgcagcttttcatcctgatggtcttatccttggaactggcacctctggggcacttgtt
aagatttgggacgtaaaaagtcagacgaatgttgcaagatttgacgggcatgtcggggct
gtaactgccatttcattttcagagaacggttacttcctcgctacagcggctcaagatggt
gtcaagctttgggatctacgcaaattgaaaaactttaggacttttactccatatgatgaa
aatacacctacacaatcagtggagtttgaccacagcggaagttaccttgcattgggaggc
tcggatatacgtgtttatcaagttgccactgtcaaaaccgaatggaactgcatcaaaact
tttccagacttgtctggcacaggtaaagcgacgagcgtaaaatttggcccagatgcaaaa
tacatagctgtaggatccatggatagaaatctcagaatatttggtctgcccgaggaggat
ggttcattggagtcgtaa
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integrated database retrieval system
