Olea europaea var. sylvestris (wild olive): 111372042
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Entry
111372042 CDS
T05244
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03420
Nucleotide excision repair
oeu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111372042
09124 Replication and repair
03420 Nucleotide excision repair
111372042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oeu03051
]
111372042
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111372042
Proteasome [BR:
oeu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111372042
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111372042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
CUE
UBA_7
Rad60-SLD
TECR_N
UBA_Ucp12
UBA_3
Rad60-SLD_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
111372042
NCBI-ProteinID:
XP_022849960
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All DBs
Position
23:175782..180770
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AA seq
370 aa
AA seq
DB search
MKLTVKTLKGSHFQIRVQPNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
ENKVSEDGFLVVMLSKGKNLGSGGSSSSLQPASTSVPTSNPISAPEAPPPALAPKSVASA
SDAAVALDPSDTYAEVASNLVANNNLEQTIQQIMDMGGGSWDKETVRRALQAAYNNPERA
VDYLYSGIPESAEVAMPVVQTAVDSVAAPGAAGAAPVSAGPNSSPLNLFPQEALSGTGAA
AGLGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLRLIQEHNQEFLQLINE
PVDGEEDMFDEPEQDMPHAVSVTPAEQEAINRMEAMGFDRALVIEAFLACDRNEELAVNY
LLENAGDFED
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtgaaaaccctcaaaggaagccatttccagattagggttcagcccaat
gacaccattatggcggtcaagaagaatatcgaggatgtacaaggcaaagacaattatcca
tgtggtcagcaattgttgatccataatgggaaagtactaaaagatgaaagtacgttggct
gaaaacaaagtctctgaagatgggtttctagtagtaatgctaagcaagggcaaaaatttg
ggatctggtggttcctcatcgtccctgcagcctgcatctacttctgtgccaacttctaat
cctatatctgcacctgaagctccgccaccagcgttggcccctaagagtgttgcatctgct
tctgatgctgctgttgcacttgacccatctgatacttatgccgaggttgcttccaactta
gttgccaacaataatcttgaacagactattcagcagatcatggatatgggcggtggtagt
tgggacaaagagacagtcaggcgtgcactgcaagctgcctataacaatcctgagcgagca
gtggattatttgtattctgggatccctgaaagtgcggaagttgcaatgccagtggttcag
actgcagtggattctgttgctgcacctggtgcagcaggggctgcacctgtttcagcggga
cctaattcatctccattgaatttgtttcctcaggaggccctttctggtactggtgctgct
gctggtcttggatcccttgatttcctcagaaacaaccaacagttccaggcattgcgttca
atggttcaagctaatccacaaattttacagcccatgcttcaggagcttggaaagcaaaat
cctcaacttctgagactaatacaagagcacaatcaagagtttcttcaattgattaatgaa
cctgtcgatggtgaagaggatatgtttgacgagcctgaacaggacatgccccatgctgtt
agtgtcacaccagcagagcaggaagccatcaaccgaatggaggctatgggtttcgataga
gcacttgttattgaggcctttttagcttgtgaccgcaacgaagaattggcagtgaactat
ctgttggagaatgctggagattttgaggattga
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