Olea europaea var. sylvestris (wild olive): 111372167
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Entry
111372167 CDS
T05244
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111372167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111372167
Spliceosome [BR:
oeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111372167
Complex C
U5 SnRNP specific factors
111372167
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Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111372167
NCBI-ProteinID:
XP_022850134
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Position
23:complement(4886121..4896944)
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AA seq
1924 aa
AA seq
DB search
MRSGRMRRAEDIPLVSDWFKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQKKKHL
FRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTT
KERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYIFSHVGQLTGMY
RYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWL
GNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQH
LSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTAC
RKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPFPPLSY
KHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLTQRAFK
EVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLV
YKWCQGINNLQDIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVTAK
NNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQMPNEFI
TYHDTRVETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVGYNNKK
CWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLFSMCGF
EVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRARQILMSS
GSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRF
PPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGITHFRSGMSHEEDQLIPNLYRY
IQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLA
YDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFK
GTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGF
QVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQK
ETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDY
DSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMN
KIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIH
KTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRS
LPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATE
PQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPSL
SDEQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEK
QAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAYGSKTDWRVRAISATNLHLRVNHIY
VTSEDIKETGYTYIMPKNILKKFICIADLRTQIAGYIYGISPPDNPQVKEIRCIAMPPQW
GTHQQVHLPSSLPDHDFLNDLEPLGWMHTQPNELPQLSPQDLAAHAQILANNKQWDGEKC
IVLTCSFTPGSCSLTAYKLTPSGYEWGKNNTDAGSNPHGYLPTYYEKVQMLLSDRFLGFY
MIPDNGPWNYNFMGVKHTAGMKYGVKLGAPREYYHEDHRPTHFLEFSNLEEAETAEGDRE
DTFT
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgagatctggtcggatgcggcgtgctgaagatataccccttgtatcagactggttcaag
gagcactgtcctccttcatatcctgtcaaagtccgagtcagttaccagaaactgctgaaa
tgttttgtgttaaatgagctgcatcacagaccacctaaggctcaaaagaagaagcacctg
tttaggtctctccaagctacaaagttttttcagaccacagaacttgattgggctgaggct
ggtctacaagtttgcaagcaagggtacaatatgctgaatctgttgatccacaggaagaat
ctgaactacctccaccttgattacaatttcaacctaaagcctgtgaagaccctcaccact
aaggaacgtaaaaaatcacggttcggtaatgcttttcatctctgtcgtgaaattctgcgt
ttgacaaagctcgtagttgatgcaaatatccagttccggctgggaaatgtcgacgcattt
caattggccgacgggttgcaatatatcttctcacacgttggccagttgacgggtatgtac
cgttacaaatataggcttatgcggcagattcgaatgtgtaaagacttgaagcacttgatt
tattaccgatttaatactggaccggttgggaaaggaccgggatgtggtttctgggcacct
atgtggagggtgtggttgttttttcttcgtggaatagtacccctcttggaaaggtggttg
ggaaatttacttgccagacaatttgagggacggcattctaaaggagttgccaaaacagtg
acgaagcagcgtgttgaaagccacttcgatttggagcttcgtgctgctgttatgcacgat
gttcttgatgctatgccagagggtattaagcaaaataaggcgagaactatcttgcagcat
ctgagcgaagcatggcgctgttggaaagcaaatattccttggaaggtacccggtttgcct
gttccaattgagaacatgattctgcgatatgtcaagtcaaaagctgattggtggacaaat
gttgctcattataaccgtgagcgtatcaggagaggagcaacagtggacaagacagcttgt
cgaaagaatcttggacgattgacccgcctttggttgaaggctgaacaggaacgccaacac
aactacttaaaagatggtccatatgtcactccagaagaagctgtggctatatacacaacc
actgtgcattggttggaatctagaaaattctctcctattccatttcctccattgtcatac
aagcatgatacaaaacttctcatccttgctcttgagaggttaaaggaatcttatagtgtg
gctgttaggttaaaccagctacaaagagaagagttgggtcttattgagcaggcttatgat
aatccacatgaggctttgtctcgtattaaacgtcatttgcttacacagcgtgccttcaag
gaagtcggcattgagttcatggacttgtacagttatttaattccagtttatgagattgaa
cctcttgagaagatcactgatgcatatctcgaccagtatctatggtatgagggtgacaaa
cgtcacctcttcccaaattggattaagcctgcagattcagagccacccccactgttggtc
tataaatggtgtcagggaatcaacaacttacaagacatttgggacactagtgaaggacag
tgtgtggtgatgcttcagaccaaatttgagaaattttttgaaaagattgatctgaccatg
cttaacaggcttctgcgactggttcttgaccataatattgctgattatgtcactgctaag
aacaacgttgtattgtcttacaaggacatgagccacacaaactcttatggtctcatacgt
ggtcttcagtttgcttctttcgtagtgcagtactatggactcgtccttgatcttttgctg
cttggtttgactcgagcaagtgaaattgctggtccaccccagatgccaaacgagttcatt
acttatcatgatactagagtagaaacaagacatccaattcgtttatactccagatacatt
gacaaggtgcatatattattccgtttcacacatgaagaagctagggaccttatccagcgg
tatctcactgagcatcctgatcctaacaatgaaaatatggttggttataacaacaagaaa
tgctggccaagagacgccaggatgagacttatgaagcacgatgtaaaccttggtagaagt
gttttctgggatatgaagaaccgtcttcctagaagcattaccactcttgaatgggagaac
agctttgtatctgtctacagcaaagacaatccgaacttactttttagcatgtgtggattc
gaagttcgtatactgcccaagattagaatgactcaagaggctttcagcaataccagagat
ggagtttggaatctgcagaatgaacagacaaaagaacgtacggcagttgctttcttacgg
gtagatgatgaacatatgaaggtgtttgagaatcgtgcaagacagattctaatgtcctca
ggctcgactacattcacaaagattgttaacaaatggaatacagcactgataggcctcatg
acatatttccgggaagcaactgttcatacacaagaactgttggatctgctggtaaaatgt
gaaaataaaatacagacccgtattaagattggattgaactcgaagatgcctagcaggttc
cctcccgttatcttttacaccccgaaggaaattggaggacttggaatgttgtcaatgggt
catatattgattccccagagtgatctccggtatagtaaacagacagatgttggcataact
cattttaggagtggaatgagtcacgaggaggaccagctgattccaaatctgtatcgttac
atacagccatgggagagtgagttcattgattcacaacgtgtttgggctgaatatgcattg
aaaaggcaagaagcccaggcacaaaataggcgtttaactctggaagatttggaagattca
tgggatcgtgggatacctcggatcaataccttgtttcagaaggaccgccacactcttgca
tatgacaaaggatggagggtacgaacagattttaaacaatatcaagttctgaaacaaaat
ccattctggtggacgcaccagaggcatgatgggaagttgtggaacttgaataactatcga
actgatgttattcaagcacttgggggagttgaaggaattcttgagcatacactgttcaaa
ggaacatacttccctacttgggaaggtcttttctgggaaaaggcttcaggtttcgaggag
tctatgaagtataagaaattgacaaatgctcaaagatctgggctcaatcaaattcccaat
cgaagatttactctttggtggtcacccactataaatcgagcaaatgtatatgttggtttc
caggtgcagctggatctaacggggatatttatgcacggaaagatacctaccctaaagata
tctctgattcagatattccgtgctcacttgtggcagaagattcatgagagtgtggtcatg
gatctttgccaggttttggatcaagagctggatgcattagaaattgagactgttcagaaa
gaaacaatccatccaaggaagagttacaaaatgaacagctcgtgtgctgatattcttctc
tttgctgcccatagatggcctatgtcaaagcccagtcttgtagccgagtccaaggatgtg
tttgaccaaaaggctagcaataaatactggatagatgtccagcttcgctggggtgattat
gactcccatgatattgagcgttacacccgggcaaagttcatggattatacaactgataac
atgtctatctatccgtcaccaactggggtcatgattggacttgatcttgcttataatctg
cattctgcattcggaaactggttccctgggtcaaaaccactgcttgcccaggctatgaat
aagatcatgaagtcaaatccagcattgtatgtcctgagagaacgtataaggaaagggctg
cagttgtattcttcagaacctacagagccttatttatcgtctcagaactatggggagata
ttcagcaatcagattatctggtttgttgatgacacaaatgtgtaccgtgtcacaatacac
aagacatttgaaggaaatctcacgacaaaacccattaatggtgccatttttatatttaac
cctaggacgggtcagctttttctgaaggtcattcacacaagtgtttgggctgggcaaaag
cgacttggccagctggcaaagtggaaaacagcagaagaagtggctgctcttgtgcggtca
ttgccggtcgaagaacagccaaagcaaatcattgtgacacgtaaaggaatgttggatccc
ctagaggtccacttgcttgattttccaaatattgtgatcaagggaagtgaactccagtta
ccttttcaggcttgcttgaagatagagaaatttggtgatctgattctgaaggccacggaa
ccacaaatggttttgtttaatatatatgatgattggttgaagagtatttcatcctacaca
gcattctctagacttatcttgatcttgcgagctcttcatgtgaacaatgagaaggctaag
atgttgctgaagcctgacaagacaattgtcactgagccccatcacatctggccatctcta
tcagatgaacagtggatgaaggttgaggttgcccttagagatctgatactttctgattat
gccaagaaaaacaatgtcaacacgtccgctttgacacaatcagaaattcgtgatataatc
cttggggctgagattactccgccatcgcagcaacgacaacaaatagccgagatagagaaa
caggcaaaggaggctagtcagctcacagcagtcactacaaggaccacaaatgtccatgga
gatgagttgattgttactacaacaagtccatatgagcaagcagcatatgggtctaaaact
gattggcgtgttagagcaatatctgccacaaatctccaccttagggttaatcacatatat
gtgacctctgaagacatcaaggaaacgggatatacatacatcatgcccaagaacattttg
aagaaatttatatgcattgctgatctgcgtactcaaattgccggatatatttatggcata
agccctccagacaatccccaagtcaaggagatccgttgtattgcgatgccaccacagtgg
ggaactcatcagcaggttcatcttccatcatctctacctgaccacgacttcttgaatgac
ttggagcctttaggatggatgcatacacagccgaatgaacttcctcagctgtctccacag
gatctagccgctcatgctcagatcctggcaaacaacaaacaatgggatggagagaaatgc
atagttttgacctgcagttttaccccgggttcctgctctttaactgcatataagctgacc
ccatcaggatatgaatggggtaaaaacaacacagatgctggaagcaatccccatggttac
ctgccaacctactacgagaaagttcagatgcttttgagtgaccgtttcctcggtttttat
atgatacctgataatggtccctggaactataattttatgggagtgaaacacaccgctggc
atgaagtatggagtgaaacttggggcacctcgggaatactatcacgaagatcacaggcca
acacatttcttggagtttagcaatttggaggaagctgaaactgctgaaggagaccgcgaa
gataccttcacttga
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