Olea europaea var. sylvestris (wild olive): 111372408
Help
Entry
111372408 CDS
T05244
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03030
DNA replication
oeu03420
Nucleotide excision repair
oeu03430
Mismatch repair
oeu03440
Homologous recombination
oeu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111372408
03420 Nucleotide excision repair
111372408
03430 Mismatch repair
111372408
03440 Homologous recombination
111372408
03460 Fanconi anemia pathway
111372408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oeu03000
]
111372408
03032 DNA replication proteins [BR:
oeu03032
]
111372408
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111372408
Transcription factors [BR:
oeu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111372408
DNA replication proteins [BR:
oeu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111372408
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111372408
MMR (mismatch excision repair)
111372408
DSBR (double strand breaks repair)
HR (homologous recombination)
111372408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RMI1_C
Motif
Other DBs
NCBI-GeneID:
111372408
NCBI-ProteinID:
XP_022850520
LinkDB
All DBs
Position
23:complement(11943712..11947161)
Genome browser
AA seq
624 aa
AA seq
DB search
MAEMISPDAISTILAKPSTDSSSELPELVVQVLDLKPTGSKFTFTASDGKMKVKAMFQST
LSSLITSGSVQNLGLIRILDYTLNDIPTKNEKYLFVTKFETVSPALDSEYKAEAKTKDSG
LEMKPKQEMDGEVKSEVNGIVLKSKQEIVTKSAAQIVHEQHGNMAPSARMAMTRRIHPLV
SLNPYQGIWTIKVRVTLKGNMRSYRNARGEGCVFNVELTDEDGTQIKATMFNEAAKKFYD
KFQLEKVYYISKGTLKVANKQFKTVQNDYEMTLNEYSEVEEASSEATFIPETKFNFVPID
ELGSYVNGRDLVDVVGVVREVSPTMSIRRKSDNETIPKRDITIADETKKTVVVSLWNDLA
TSVGQELLDMADKSPVVAIKSLKVGDFQGLSLSTLSKSVVVINPDLPEAKKLRSWYDSEG
KETSLAFVGSGLSPSTKNGVQSMYSNRVLLSHITSDPLLGEDKPAYFNVKAYISYIKPDQ
TMWYRACKTCTKKVTDAIGSGYWCEGCQKNDEECSLRYIMTVKVSDASGEAYFSVFNEQA
EKIIGCSADELNELKSQDGESSYQLKLKEATWIPHLFRVSVTLQEYNNEKRQRITIRAVA
PVDYATESSFLLEKILKMKISKIE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatgattagcccagatgcgatatcgaccatattggcgaaaccatctaccgat
tcgtcttcagagttgccggaattagtcgtacaagtactggatctaaagcctactgggagc
aaattcacatttaccgcgagtgatgggaaaatgaaggtcaaggccatgtttcaatctact
ctgtcgtctttaatcacctctgggagtgttcagaacttgggtcttattcggattcttgat
tacactctaaatgacatcccaacgaagaacgagaagtacttatttgtaacaaaatttgag
accgtgtctcccgcactcgactctgagtataaggccgaggcaaaaactaaggatagtggc
ctcgaaatgaagccaaaacaggaaatggatggtgaagtaaaaagtgaagttaatggcatc
gttttgaagtcaaagcaggaaattgtgactaaatcagctgctcaaatagttcatgagcaa
catggaaatatggcaccgtctgctcgaatggcaatgacccgaagaattcatccgcttgtt
tccttgaatccatatcaaggaatttggacgattaaggttcgtgtaaccttgaaaggtaac
atgcggtcgtataggaatgccaggggagaagggtgtgtgttcaatgtagaattgactgat
gaagatggcacacaaataaaagcaacaatgtttaatgaggctgcgaaaaagttttacgat
aaatttcagttggagaaggtctattacatatcgaagggaactctgaaagttgctaacaag
caatttaaaactgtgcaaaatgattatgaaatgacgttaaatgaatattctgaagtcgag
gaagctagtagtgaggctacttttatccccgaaacaaaattcaatttcgtcccaattgat
gaattaggttcatatgttaacgggcgagatcttgttgatgttgttggtgttgttcgagaa
gtatctccgactatgagtattcgacggaaaagtgataacgagacaattcccaagcgtgat
ataacgatcgctgatgagacgaagaagactgtcgttgtgtctctatggaatgatcttgcc
acgagtgtaggacaagaactgctagacatggccgataaatctccagtagttgcaattaaa
tcactcaaagttggagattttcaggggttgtcactgtcaacgctgagcaaaagtgttgtg
gtaatcaatccagacttaccagaagccaaaaagttgagatcctggtatgattctgaaggc
aaagaaacttctttggcatttgttggttctggcttaagcccttcgactaaaaatggggtt
caatctatgtactccaatagggtcttgttatctcatatcaccagtgacccattgttgggc
gaggacaagcctgcatatttcaatgttaaagcgtacataagttacatcaaacccgaccaa
actatgtggtatcgtgcttgcaagacttgtaccaagaaagtcacggatgctattggatcc
ggatattggtgcgaagggtgccagaagaacgacgaagaatgcagcttgagatatataatg
acagtaaaagtttctgatgctagtggtgaagcctatttctctgttttcaacgaacaagca
gagaaaataatcggatgctctgcagatgaacttaacgagctaaaatcccaggatggagaa
agttcttatcaattgaaactgaaggaagctacctggattccacacctatttcgagttagt
gttactctacaagaatacaacaatgagaaaaggcagaggataactatcagagctgttgct
cctgtggactatgcaactgaatcgtcgtttttgcttgaaaaaatattgaagatgaaaatc
tctaaaatagagtaa
DBGET
integrated database retrieval system
