Olea europaea var. sylvestris (wild olive): 111372538
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Entry
111372538 CDS
T05244
Name
(RefSeq) Niemann-Pick C1 protein-like
KO
K12385
Niemann-Pick C1 protein
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111372538
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111372538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oeu02000
]
111372538
Transporters [BR:
oeu02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
111372538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
DUF6338
MMPL
Motif
Other DBs
NCBI-GeneID:
111372538
NCBI-ProteinID:
XP_022850654
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MGFLQLFGYVVFAFKVLFIVSIVNAERSLAANATQGKRHSEEFCAMYDICGARSDGKVLN
CPFGSPSVKPDELLSAKIQSLCPTITGNVCCTERQFETLRSQVQQAIPFLVGCPACLRNF
LNLFCELTCSPNQSQFINVTSISKVGNNLTVDGIDFYITDTFGEGMFESCKDVKFGTMNT
RAIEFIGAGAKNFREWYAFIGRKAPLGVPGSPYAINLSPNAPESSGMKPMNVSTYSCGDT
SLGCSCGDCPSSPVCSNSAPSSPHQEGSCYVRIGSLKAKCVDVAVTLLYILLVSAFLGWG
FVHKKRRRSSDSRTKPLVNVTNGGVVRQVNRQKDDNIPMQMLEDVPQISSGVQLSIVQGY
MSKFYRRYGTWVARNPKLVLCSSLAIVLVLCLGLIRFQVETRPEKLWVGPGSRAAEEKQY
FDNHLAPFYRIEQLIIATIPDMGGKAPTIVTENNIKLLFDVQKKVDAIKANFSGEMVSLT
DICMKPLGKDCATQNVLQYFKMDPANYDGFGGLEHVEYCFQHYTSADTCMSAFKAPLDPS
TSLGGFSGNNYLEASAFIVTYPVNNAIDKEGNYTKRAVAWEKAFIQLAKEELLPMVLAKN
LTLSFSSESSVEEELKRESTADAITILISYLVMFAYISLTLGDTPRFSSCYISSKVLLGL
SGVMLVMLSVLGSVGFFSAIGIKSTLIIMEVIPFLVLAVGVDNMCILVQAVKRQQSELPL
EGRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFV
ALIIFDFLRAEDNRIDCFPCIKLSGSNAEPDKGSHLQKPGLLARYMKEIHAPFLNIWGVK
IAVISVFVAFALASIALCTRIQPGLEQQIVLPRDSYLQGYFNNVSEYLRIGPPLYFVVKN
YNYSSDSRQTNQLCSISQCDSNSLLNEIARASLVPESSYVAKPAASWLDDFLVWISPEAF
GCCRKFTNGSYCPPDDQPPCCLSSDGSCGLSTICKDCTTCFRRSDLQNARPSTTQFREKL
PWFLSALPSSDCAKGGNGAYTNNVELKGYEDGIIQASAFRTYHTPLNKQSDFVNSMRAAR
DFSSKMSDSLKIEVFPYAVFYMFFEQYLSIWKTALINLAIATGAVFIVCLVITCSFWTSA
IILLVLIMIVVDIMGVMAILNIQLNAVSVVNLIMSVGIAVEFCVHITHAFLVSSGDRNQR
MKEALTTMGASVFSGITLTKLVGVLVLCFSKTEVFVVYYFKMYLALVLLGFLHGLVFLPV
LLSMFGPPSRCVLIEKQEDRPSTSSQF
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctccaactgtttggctatgtagtttttgcgtttaaggtgttatttatcgta
tctatagtaaatgcagagaggtctttagctgcaaatgccacacaggggaaaaggcattct
gaagaattttgcgccatgtatgacatctgtggagcacgcagtgatgggaaagtactgaat
tgccctttcggttccccatctgttaagccagacgaactgctttcagcaaagattcaaagt
ttgtgcccaactataactggaaatgtctgttgtacagagcgtcagttcgagactttaagg
tcgcaagtccaacaagcaatcccttttcttgtaggatgtccagcatgcttgagaaatttt
ttgaatttattctgcgagcttacatgttctcccaatcagagtcagtttatcaatgtgact
tccatttccaaggttggaaataatttgaccgtcgatggaattgacttttacatcactgac
acttttggtgaaggaatgttcgaatcctgcaaggatgttaaatttggtacaatgaatact
cgagccatagaattcattggtgccggtgctaaaaattttagggagtggtatgcttttatt
ggtagaaaagcaccgcttggtgtgccaggatcaccgtatgctattaatctatctcctaat
gctcccgagtcatctggaatgaaacctatgaatgtgtctacatattcatgtggtgacact
tcgttaggctgttcgtgtggtgattgtccttcatctcctgtctgctcaaattcagcccct
tcttctcctcaccaggaaggttcatgttatgtgagaatagggtctcttaaggcaaaatgt
gttgatgttgctgtaacattattgtatatattattggtctcagcgtttcttgggtggggt
ttcgtccataaaaagagaaggagaagttctgactctagaacaaaaccattagttaatgtc
accaatggtggtgttgttcgtcaagtaaacaggcagaaagacgacaatataccaatgcag
atgcttgaggatgttccccaaatttctagtggcgttcaactttcaatcgtgcaaggatac
atgtcaaagttttacaggagatatggaacatgggttgccagaaatccaaaacttgtgttg
tgttcgtcactggctattgttcttgtgctttgcttaggtcttattcgtttccaagtagag
acaaggccggagaagctatgggtaggcccagggagtagagctgccgaagaaaaacaatat
tttgacaatcaccttgcccccttttacagaatcgagcagctcataatagcaacaatccca
gacatgggcggaaaagcaccgacaattgtgacagaaaacaatataaagttactgtttgat
gtacagaaaaaggtagatgctattaaagctaatttttctggtgagatggtatctctgaca
gacatttgcatgaagcccctcggcaaagattgtgcaactcagaatgttcttcagtatttc
aagatggatcctgctaactatgatggctttgggggtcttgaacatgttgaatattgtttt
cagcattatacttcagcggacacgtgtatgagcgcatttaaagctccacttgatccaagc
acttctcttggtggtttctctggaaataactatttggaggcttctgcattcattgtgacc
taccctgtgaacaatgcgattgataaggaagggaattatactaagagggcagtggcatgg
gagaaagccttcattcagctagcaaaggaggaactcttgccaatggtactggctaaaaac
ttaacgctctcattttcatcggaaagttctgttgaggaagaactaaaaagagaaagtact
gcagatgctataactatcttgataagctatcttgtaatgtttgcttacatatctctgact
ctgggagatactcctcgtttctcctcgtgctatatctcatctaaggtattgcttggtctt
tcaggagttatgcttgtcatgctttctgtacttggatctgttgggtttttcagtgcaatt
ggaataaaatcaacacttataataatggaagtaatcccttttcttgttttggctgttggg
gtagacaacatgtgcatattggtgcaagcagttaaacggcaacagtcagaattgccttta
gagggacgaattagtaatgcactagtagaagttggaccatctataacactagcaagtcta
tctgaggttttagcatttgcagttggaagttttattcctatgccagcttgccgtgttttt
tccatgtttgcagcacttgctgttctgttggacttccttctgcaagttactgcatttgtt
gctttgattatttttgacttcctgagagctgaggacaacaggattgattgttttccttgt
ataaaactctctggttcaaatgctgagcctgataaaggcagtcatctacaaaaacctgga
ctgttagctcgatatatgaaggaaattcatgctccctttctgaatatttggggtgttaaa
atagcagttatctctgtctttgttgctttcgcattggcaagcattgccttgtgtacaaga
attcaacctggtttagaacaacaaattgttcttcccagagactcgtatcttcagggttac
tttaataatgtctcagagtatctcagaataggaccaccactgtactttgtcgtgaaaaac
tacaactatagttcagattcaagacaaacgaaccagctttgctccataagccaatgtgat
tctaattctcttttaaatgagattgcaagagcttcactagtaccagagtcgagttacgtt
gctaaacccgcggcttcgtggcttgatgattttcttgtttggatctctccagaagctttt
ggatgttgtaggaaattcacaaatggcagttattgtccccctgatgaccagccgccttgt
tgtttatcaagtgatggatcgtgtggcctcagcacaatttgcaaggattgcacaacgtgt
ttccgccgctcagatttacaaaatgcacgcccatccacgacacaattcagggagaagctt
ccatggtttcttagtgctttgccttcttctgactgtgcaaaaggtggaaatggggcttat
acgaacaatgtcgagcttaaaggctacgaggatggaatcattcaagcatcagcatttcgt
acatatcacacaccgcttaataaacaatctgattttgtcaactcaatgagggctgcacga
gattttagttcaaaaatgtctgattctttaaagattgaggtgttcccatatgctgtattt
tatatgttctttgagcagtatctcagcatatggaagacggcactaatcaacctagctata
gctactggtgctgttttcatcgtttgtctagttatcacatgcagtttctggacttcagca
attattcttcttgtgttgataatgatcgttgtggatatcatgggtgtaatggcaattttg
aatattcaactcaatgccgtgtccgttgttaacctcataatgtccgtaggtatagccgtc
gagttctgtgtgcatattacacatgctttcttggtaagtagcggagatagaaatcaacga
atgaaggaggctctgacgacaatgggggcttctgttttcagtggaatcacactcacgaag
ctcgttggtgtgcttgttctttgcttttcaaagaccgaagtctttgtggtttactatttc
aaaatgtaccttgctttggtgctcctaggtttcttgcatgggctggtctttttacctgta
ctattgagcatgtttggtcctccatcgaggtgtgttctcattgaaaaacaagaggatcgg
ccatcaacttcgtcacagttctaa
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