Olea europaea var. sylvestris (wild olive): 111372932
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Entry
111372932 CDS
T05244
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04142
Lysosome biogenesis
oeu04145
Phagocytosis
oeu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
111372932
04142 Lysosome biogenesis
111372932
04148 Efferocytosis
111372932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oeu04131
]
111372932
Membrane trafficking [BR:
oeu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111372932
Hops complex
111372932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
Clathrin
VPS18_RING_C
zf_RING_Vps8
zf-RING_11
zf-ANAPC11
zf-rbx1
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_UBOX
RPN1_RPN2_N
Beta-prop_VPS8
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111372932
NCBI-ProteinID:
XP_022851127
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MEQRRQVFSVDLLERYAAKGRGEITCMAAGNDVIVLGTSKGWIIRHDFGVGDSFDIDLSA
GRPGEQSIHRVFVDPGGSHCIAVVVGNGTSDTFYTHAKWTKPRVLSKLKGLVVNAVAWNR
QHIAEASTREVILGTDNGQLHEIAVDEKDKKEKYIKFLFELSELSEAFTGLQMETASINN
GTRYYVMAVTPTRLYSFTGIGSLDSVFASYVGRAVHFMELPGEIPNSELHFFIKQRRAIH
FAWLSGAGIYHGGLNFGAQRSSPNGDENFVENKALLDYSKLGEGASVKPSSLAVSEFHFL
LLVRNKVKVVNRISELIVEELYFDQTPDAASRSVIGLCSDASAGLFYAYDQSSIFQVSVN
DEGRDMWKVYLDLKEYAAALSNCRDTIQRDQVYLVQAEDAFNTKDFVRAASFYAKINYVL
SFEEITLKFISIGEQDALKTFLLRKLDNLAKDDKCQITMISTWATELYLDKMNRLLLEDD
TASENSSSEYQSIIKEFCAFLSDSKDVLDEATTIKLLESYGRVDELVFFASLKEQHEIVV
HHYIQLGEAKKALQVLQKLNVPIDLQYKYAPDLIMLDAYETVESWMIRKDLNPRKLIPAM
MRYSSESHSKNETHEVIKYLEYCVHRLQNEDPSVHNLLLSLYAKQEDESALLRFLQCKFG
KGRPNGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEADK
VEDDEDLRKKLWLMIAKHVIGQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALI
DDFKEAICSSLEDYNEQIEKLKEKMNDATRGADNIRNDISALAQRYAIIDRDEECGVCRK
KILNMTGSYPMTGVYTSVGSMAPFYVFPCGHSFHAQCLIAHVTKCTTEAQAEYILDLQKQ
LTLLGNGSRKEMNGSLSEVEPITSMTAGDKIRSQLDDAIASECPFCGDLMIREISLPFVL
PEETEVASWEIKPTNLGNQKSVSLTV
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagacggcaggttttctcggtggaccttctagaaaggtacgctgctaagggg
cggggagaaatcacgtgtatggccgccgggaacgatgtgattgtgttgggtacaagcaaa
ggctggatcattcgacacgattttggcgtcggcgattcttttgatatcgatctctctgct
ggtcgacctggggaacagtccatccacagagtttttgtggacccaggaggcagccattgc
attgctgtggtagtcggcaatggaacctctgacacattttacacgcatgcaaagtggacc
aagcctcgtgtattgagcaaactgaaaggccttgtagtgaatgctgttgcctggaatagg
caacatatagcagaagcttccacaagggaagtcattcttggtactgacaatggccaactt
catgaaattgctgtcgacgagaaggacaagaaggaaaagtacattaagtttttatttgaa
ctcagtgaactctctgaagcttttacgggtttgcagatggaaacagcaagcataaacaat
ggaactcgttattatgtaatggctgttactcccacccgtctttattcttttaccggaata
ggctctctggattctgtttttgctagttatgtgggccgtgcagttcattttatggaactt
cctggtgaaattcccaacagtgaactgcatttctttataaagcaaagaagagcaatacat
tttgcatggctatctggggcaggaatctatcatggtggtcttaattttggagcacaacgc
agttcaccaaatggggatgaaaactttgtggagaacaaggctcttttggactattcaaaa
ctaggcgaaggagcttctgttaaaccaagttccctggcagtatctgagtttcattttctt
cttcttgtcagaaacaaggttaaggttgtgaataggataagtgagctgatagttgaggaa
ctttattttgatcaaacacctgatgccgcttcaaggagcgttataggtttgtgcagtgat
gcgtctgctgggcttttctatgcatatgaccaaagttccatcttccaggtgtccgtgaat
gatgaaggccgagatatgtggaaagtctatttggacttaaaagaatatgctgcagctttg
tcaaactgtcgtgacaccatccaaagagaccaagtttatctcgtgcaggctgaagatgct
ttcaatacaaaggattttgtcagagcagcttccttttatgcgaagattaactatgtatta
tcatttgaagagatcactttgaagtttatcagcataggcgaacaggatgctttaaaaacc
ttcttgttacggaagcttgataatcttgcgaaggatgacaaatgccagatcacaatgatt
tccacttgggcaactgagttatacttagataagatgaatcggctacttttggaagacgat
actgcatctgagaatagtagttcagagtaccaatcgattattaaggagttttgcgccttt
ttgagtgacagcaaggatgtattggatgaggcaacaaccattaagctgctagaaagctat
ggtagggttgatgaattggtattctttgctagtcttaaggagcaacatgagattgtggtc
catcattatattcagctgggagaagcaaagaaagcactgcaagttcttcagaaacttaat
gttcccatagaccttcagtacaagtatgccccagaccttatcatgcttgatgcatatgaa
actgtagaatcatggatgattaggaaagacctgaatccaaggaagctcattcctgcaatg
atgcgttattcaagtgaatcgcattcaaaaaatgaaactcatgaagtaataaaatatctg
gagtattgtgttcatcgtttgcagaatgaggatcctagtgttcacaatttgttgctctca
ttgtatgccaagcaggaggatgagagtgctcttctgcgttttctgcaatgcaagtttgga
aaagggcggcccaatggtcctgaattcttctacgatccaaaatatgcattgcgcctttgt
ctcaaggaaaaacggatgcgcgcctgtgtccatatatacagcatgatgtctatgcatgaa
gaagcagttgccctggctttgcaggtcgatccagagcttgctatggctgaagctgataag
gttgaagatgatgaagatttgcggaaaaaactttggcttatgattgccaagcatgtcatt
ggacaggagaagggaacgaaaagggagaacatccgaaaggcaatagcatttctcaaggaa
actgatggacttttaaagattgaagatattttaccctttttcccagattttgcgttgatt
gatgatttcaaggaggcaatctgctcatcattggaggattacaacgagcaaattgagaaa
ctcaaagagaagatgaatgatgctacccgtggtgcagacaacattaggaatgatatcagt
gcacttgcacaacgatatgctatcatcgatcgtgacgaggaatgtggggtttgtcggaag
aaaatattaaatatgactggcagctacccgatgacgggggtttacacatcagttggatca
atggctcctttctatgtttttccatgtggacattccttccatgctcagtgcctgattgcc
catgtcactaagtgcactactgaagctcaagctgaatatatattggatctccaaaagcag
ctgactcttttaggtaatggatcgaggaaggaaatgaatggtagtttatctgaagtcgaa
ccaattacgagcatgactgctggagataagatccgatcacagttggatgatgccatagcc
agcgaatgcccgttttgtggtgacttgatgatccgtgagatatcgctgcctttcgttctt
ccagaagaaacagaggtggcatcttgggagataaaaccaactaaccttggaaatcaaaag
agcgtatctttaactgtataa
DBGET
integrated database retrieval system
