Olea europaea var. sylvestris (wild olive): 111375961
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Entry
111375961 CDS
T05244
Name
(RefSeq) DNA mismatch repair protein PMS1-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03430
Mismatch repair
oeu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111375961
03460 Fanconi anemia pathway
111375961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111375961
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111375961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
111375961
NCBI-ProteinID:
XP_022854651
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MCEVSHSTSNFVSSLNRCIVSFFFPLSGFVIAYALISKGVRLVCTNTTGKNVKSVVLKTQ
GCGSLRDNIVALFGMGTVSCLEPVTVCMSDGCLVEGFVSKSGYGSGRSMGDRQFFFVNGR
PVDMPKVGKIVNELYRGANSRQYPIAIMNFTIPTQAYDVNVTPDKRKIFFSDESSILHSL
REALENIYSPNQANYHINRVEELDEKKHACEIISPDKSSLLSPKQSSPDGGVSQAEACSS
KQCANSNIILKTAQGDVKHSPIEEVTHSNSVCSTVKDFTLRVHSYKKNSSASPSKQLMNF
SYAKTDEVAPSPSRPAQKVSTDTNKSMGQASVVQTSLDNFVMVNKRKHESINTALSEVPL
LRNGPALSRSSESSRATYSARSSSPFNFIEIDDSDKINCSEPQSAKFSRVDSICNEAGTT
VLFPLAYKNQNGEVSQV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggtgtcccacagtactagcaactttgtttcctcacttaatcgttgcattgtg
tccttttttttccctttatctggctttgttattgcatatgctcttatttctaaaggtgtt
agattagtttgcaccaacacaactggtaaaaatgttaagtctgtagtgcttaaaacacag
ggttgtggatctctcagagacaatattgtcgcattgttcggtatgggtactgtttcctgc
ttagagcctgtgacagtttgtatgtcggacggttgcctagttgaaggttttgtttccaag
tctggctatggaagtgggagaagtatgggagatcggcagttcttttttgttaatggtcga
ccagttgatatgccaaaagttggcaagattgtgaatgagttatatagaggtgcaaactcc
cggcaatatcctattgcaatcatgaattttactattccaactcaagcctatgatgtcaat
gtgactcctgataaaaggaaaatatttttttccgatgaaagttccattttgcactcgtta
agagaagctctggagaatatttactcaccaaatcaagctaattaccatattaatagagtt
gaggagcttgatgaaaaaaagcatgcttgcgagattatctccccagataaaagctctctg
ttgtcaccgaagcagtcatctccagatggtggtgtgtctcaagccgaagcatgctctagt
aaacaatgtgcaaatagcaacattattctcaaaacagctcaaggggacgtcaaacattca
cctatagaggaggtgactcatagcaatagtgtttgttctaccgtaaaagactttactctt
agagttcacagttacaaaaagaacagctctgcgagccccagtaagcagcttatgaatttt
agctatgcgaaaactgacgaagttgctccttccccttcaagacctgcacagaaagttagc
actgatactaacaagtcaatgggacaagcaagtgttgttcagacatcacttgacaatttt
gttatggtaaataagagaaaacatgaaagtatcaatacagcattatctgaagttcctctc
cttagaaatggacctgctttaagtcgatcaagtgaaagcagccgagcaacgtattctgca
cgttcaagctctccatttaattttattgagattgatgattctgataaaatcaactgcagt
gaacctcaatctgctaaattttccagagttgacagtatctgtaacgaagctggcaccaca
gttttgtttcctttagcttacaaaaaccaaaatggagaagtcagccaggtatag
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