Olea europaea var. sylvestris (wild olive): 111377991
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Entry
111377991 CDS
T05244
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111377991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111377991
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111377991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111377991
NCBI-ProteinID:
XP_022856921
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MSTTNGSNDLSSEMEVDAFRRLFPLRFYERHLLESIRPDGRPLGRARDTTIALGAVASAN
GSALAKIGCTTMLAAVKLEVMTPKLESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVIT
KQLTDIILSSGMIDLKELSLVSGKAAWLAYLDIYCLDADGSLFDAALLSAVAAFSHLQIP
VVSLNDNGRIVLISEENSGAMWEKEPVNKEKRKLKLDTLPFSLTCALHKNYILADPSAEE
ESIMETYLTVVLDSSLQLVSLNKPGGPGLAQTSAIQDCVALTIKRVKELQKILNEAISDM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctactaccaatggctcaaatgatttgtcttcagagatggaggtggatgcatttaga
cgccttttcccactacgcttttatgagcgccacctgctcgaatcaatacggcctgatgga
cggcctcttggaagagctagagatacaacaattgcactcggagctgttgcatctgctaat
ggatcagcattagcaaagataggttgcactaccatgctggctgcagttaaattggaagtc
atgacaccaaagttggagtcacctgatgagggttgcatagctattgatttccatatgcct
ccaatttgttctccactggttcgccctggcagaccagcagaggcagcaccagtaataacg
aagcaattaactgacatcatcttgagttctgggatgattgatttaaaagaattatctttg
gtcagtggaaaagctgcttggttggcctacttggacatatactgtctcgatgctgatggc
tccctatttgatgcggcgttgctttctgctgtggctgcgttctcacacttgcaaattcct
gtagtttctctcaatgataatggaagaatagttcttatttctgaggaaaattctggtgca
atgtgggaaaaggaaccagtgaataaagagaagagaaagctgaagttggatactctacca
ttctccttgacatgcgcgcttcacaagaactacattctggcagacccttcagccgaggaa
gaatctattatggaaacatatttaactgtggtattggattcgtctttgcagctcgtgtct
cttaataaaccaggtggacctggtctggctcaaacatcagccatccaggattgtgtagca
ttaacaataaagagagtgaaagaacttcagaagatattgaatgaagcaatttctgatatg
gaagtggactag
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