Olea europaea var. sylvestris (wild olive): 111378324
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Entry
111378324 CDS
T05244
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111378324
03036 Chromosome and associated proteins [BR:
oeu03036
]
111378324
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111378324
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111378324
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
111378324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
ResIII
AAA_19
DEAD
UvrD-helicase
PhoH
AAA_16
AAA_22
Mov-10_helical
Helicase_RecD
SLFN-g3_helicase
ATPase_2
DUF2152
AAA
Motif
Other DBs
NCBI-GeneID:
111378324
NCBI-ProteinID:
XP_022857270
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MSTVGDKSDDEYSVIGDKGDIGFVDFGNCKSVCSYNPAEESDVVNISVPFPLVRGKPQSG
FVGETTCDSITIMNTTNGPLDLWSVSIYDAKPPESFTVSLMKPPSADSDVEYIQEFVESF
SLEDRVLRPGQTLTVWLSCKTKEIGLHTAAVHFSVGDDTIERVVFVLAEDKISQSLSSIK
PFYRARKKKPAVVDVFSADGAFVTGSRPNKPSNRVFKHRLREFRVPVHIRDMVNNKQIPD
PVNEGLTEENYVPFFQTLLNMEEIKMEEDMRAYDMEHVSMKSKRNNLLSLEVPGLAERRP
SLVNGDYIFVKLASEDTTEHGTYQGFIHRVEAEEIHLKFNINFHSSHRDSNLYNVQFNYN
RLNVRRLYQAIEAARHLERDFLFPSESSRRRLVQPKSFVSTLGTLNDEQMRAIKMILACK
GGSPYVIHGPPGTGKTSTFIEAILQIYTNRRYARFLVCAPSNSAADHILERLISNPSAKI
QNTEIFRLNAITRPFEDVNPDYIDFCFDEDSIFKCPHIKDLLRYRIIISTYTSASLLYTE
GINRGHFSYIFLDEAGQASEPDTMVPLSHLCCKNTVVVLAGDPLQLGPVIFSKDAETYGL
GTSYLERLFDNKLYGSGDENYITKLVRNYRSHPAILHLPSELFYGGELISCYEESTGFST
SRENFLPKKEFPLLFVGIQGCDEREGSNPSWFNRTEVSKVVEIIKDLIEHDGLKEEDVGV
ITPYRQQVLKIRRVLENFGRLNIKVGSVEQFQGQEKQVIIISTVRSTVKHNEFDKVHYLG
FLSNSRRFNVAITRAKSLLIVTGNPHILCKDPYWNKLLWYCVDNGSYKGCFLPERQEFSE
KEFGEEQYPGYEVENHHQPSDAQWGGDWGYEENNYQPSDVQWGGDWGEPANDFKPSDVQW
GEAENDFKPLDVQRGDAENSYEPSNVQCGEAENNFKPSDAPWDDL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagttggtgataagtccgatgatgaatactccgtcattggagataaaggcgat
attggatttgttgattttggaaattgtaaatctgtttgtagctacaatcctgcagaagag
agtgatgtagtcaatatatctgttccatttcctttagtcagaggaaagcctcaatcggga
tttgttggagaaactacgtgtgattccataaccataatgaacactactaacggaccatta
gatctctggtctgtcagtatttatgatgcaaaacctccggaatccttcacagtttctttg
atgaaacctccaagtgcagattctgacgtggaatatatccaagaatttgtagaatcattt
tccctggaagacagagtgctaagaccaggtcaaactttgactgtttggttgtcatgcaaa
actaaggaaattggcttgcacactgcagctgttcactttagtgtgggggacgatacaata
gaaagggttgtttttgtgttggcagaagataagatctcccagtctttatcttctattaaa
cccttttacagagctcgtaaaaagaaaccggctgtggttgatgtattttctgctgatggt
gcgtttgttacgggttcacgccctaataagccttcaaatcgtgtgtttaagcaccggcta
cgtgaatttcgtgtgcctgtacatatcagggacatggtgaataacaagcagattccagat
ccagtcaatgagggtctaaccgaagaaaactatgttccattcttccaaacattacttaac
atggaagagatcaaaatggaggaagatatgcgggcatatgacatggagcatgtttctatg
aagagcaagagaaacaatttattatccctcgaggtcccaggattagctgaaaggaggcct
tcactcgtaaatggggattatatatttgtgaagcttgcttctgaggatacaactgagcat
ggtacttatcagggcttcattcaccgggtcgaggctgaagaaatacatttgaagtttaac
ataaattttcactcgagtcacagggacagtaacctttataatgtacaattcaactataac
cgactcaatgttagaaggttgtatcaggccattgaagctgctcgacatttggagagagac
tttctattcccatctgagtcctctagaagaagactggttcaacctaaatcatttgtatca
acattgggtacccttaatgacgagcagatgcgtgcgattaaaatgatccttgcctgcaaa
ggagggtctccatatgtgattcatggacccccaggtacaggaaaaacatcgacatttatt
gaagctatattgcagatctacactaatagacgatacgctcgatttctagtatgtgcacct
tcaaatagtgcagctgaccacatccttgagcgactcatcagcaatccatcagcaaagatt
cagaacactgaaatctttaggctcaatgcaatcacgcgaccttttgaggatgtcaaccct
gattatatcgacttttgctttgatgaagattctattttcaagtgtcctcacattaaggac
cttttgcgatacaggatcattatatcaacatatacaagtgcctctcttctctatacggaa
ggcataaacagaggccatttctcgtacattttcttggacgaggcaggccaagcttcggag
ccagatacaatggttcctctatctcacctttgttgtaaaaatacagttgttgttcttgct
ggagatcctttgcagctgggtcctgtaattttttctaaagatgctgaaacctatggattg
ggaacttcatatttggagaggctgtttgataacaagttatatggtagtggagacgagaat
tacatcaccaaattagttagaaattatcgatctcatccagcaattctgcatcttccgtca
gaattgttttatggcggggaattgatctcgtgctacgaggagagtacgggtttttccaca
tcccgggaaaatttcctcccaaagaaggagttccctttgctttttgtcggtattcaaggt
tgtgatgagagggaaggaagcaatccatcatggtttaacagaactgaagttagcaaggta
gttgagattatcaaggacctaatcgagcatgatgggctgaaggaagaagacgttggggtt
ataacaccttacaggcagcaggttctcaaaataagacgggtgttagaaaattttggtcga
ctcaacattaaagttggcagcgtcgaacaattccaagggcaagagaagcaagtcattatt
atatctactgtgcgatcaactgtaaaacacaatgaatttgacaaagtacattatttggga
tttttgagcaattctagaaggttcaacgtagcaataacccgagccaaatcgttgcttatt
gttactgggaatccacacatcctttgcaaggatccatattggaacaagctcctctggtat
tgtgtggataatggctcctataagggctgctttcttcctgaaaggcaggaattcagcgaa
aaagagttcggagaggaacagtatccaggctatgaagtggaaaatcatcatcagccatct
gacgctcagtggggtggggattggggttatgaagagaataattatcagccctctgatgtt
cagtggggtggggattggggtgagccagcaaatgattttaagccctctgatgttcagtgg
ggtgaggcagaaaacgattttaagcccttggatgttcagaggggtgatgcagaaaatagt
tatgagccctcaaatgtgcagtgcggggaggcagaaaacaactttaagccctcggatgca
ccgtgggatgacttgtaa
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integrated database retrieval system
