KEGG   Olea europaea var. sylvestris (wild olive): 111379793
Entry
111379793         CDS       T05244                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03013  Nucleocytoplasmic transport
oeu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111379793
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111379793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111379793
   04131 Membrane trafficking [BR:oeu04131]
    111379793
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111379793
Membrane trafficking [BR:oeu04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    111379793
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111379793
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111379793
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_Vps41 WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR41 WD40_2 Beta-prop_WDR36-Utp21_2nd WD40_RFWD3
Other DBs
NCBI-GeneID: 111379793
NCBI-ProteinID: XP_022859001
LinkDB
Position
Unknown
AA seq 301 aa
MPAQKIETGHNDVVHDVSMDYYGKRVATASSDVSIKIIGVSNNSTSQHLATLIGHQGPVW
QVAWAHPKFGSMLASCSYDGKVIIWKEGNHGDWSQFHVFTDHKSSVNSIAWAPHELGLCL
ACGSSDGNISIYTAQSDGGWDTTKIDQAHPIGVTSVSWAPSMAPGALVGSGLLDPVQKLA
SGGCDNTVKVWKLYNGNWKMDCFPALQMHCDWVRDVAWAPNLGLPKSTIASASQDGTVVI
WTSAKESDQWEGTVLKDFKVPVWRVSWSLTGNLLAVASGDNNITLWKEAVDGEWQEVTTV
H
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgcacaaaagatcgaaacaggtcacaacgacgttgttcatgatgtatccatggat
tattatggaaaaagagtggcaacagcatcatctgatgtctctataaaaataatcggtgtc
agcaacaattctacttctcaacatctcgctactttgattgggcatcaaggtccagtttgg
caggtagcttgggcacaccccaaatttggctcgatgcttgcttcttgttcttatgatggt
aaggtcatcatctggaaggaaggaaatcatggtgactggtctcaatttcatgttttcact
gaccacaaatcatctgtcaactctattgcttgggcaccacatgagctgggactctgtttg
gcttgtggatcgtctgatgggaatatctcaatctacacagctcaatcagatggtggttgg
gacacaacgaaaattgaccaagcacaccccattggagtcacatcggtttcatgggcccct
tcaatggcccctggtgctttagttggatctgggcttctggatcctgttcagaagttggcg
tctggtggctgtgacaatacagtgaaggtgtggaagctatataacggtaattggaagatg
gactgcttccctgctttacaaatgcactgcgattgggtgagagatgttgcctgggcacca
aatttggggcttccaaaatcaacaattgccagtgcttcacaggatggtacggtggtcata
tggacttcggcaaaagaaagcgatcaatgggagggtacagttttgaaggattttaaggtt
cctgtttggagggtctcatggtctctgactgggaacttgttggccgtggcttctggtgac
aacaatatcacattatggaaagaggcagttgacggggagtggcaagaggtcaccaccgtc
cactag

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