Olea europaea var. sylvestris (wild olive): 111379993
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Entry
111379993 CDS
T05244
Name
(RefSeq) uncharacterized protein LOC111379993
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111379993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111379993
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111379993
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111379993
Messenger RNA biogenesis [BR:
oeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
111379993
DNA repair and recombination proteins [BR:
oeu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
111379993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
111379993
NCBI-ProteinID:
XP_022859213
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MESILKQYFGFSKFRPYQKEIVEKILDGKDSLVVMATGSGKSLCYQVPPLIAKKTTVVIS
PLISLMQDQVMALKQRGIRAEYLSSAQTDRSAHSNAESGQYNILYMTPEKACVLTTSFWS
RLLISGICLLAVDEAHCISEWGHDFRVEYKQLGRLRDVLPNVPFVGLTATATEKVRIDII
NSLKMKNPHITIGSFDRQNLFYGVKYSDRSSAFVDELVKEISKYRNSRSSTIVYCTTVKD
AEQIFKFLLEDGIEAGIYHGQMSNKAREESHRAFIRDEFYVMVATIAFGMGIDKPNIRHV
IHYGCPKSLESYYQESGRCGRDGIPSTCWLYYARSDFGKADFYCSEARTADQRKAIMESF
VAAQRYCMLTTCRRKYLLEYFGEKYGSVNCGTCDNCTSSKNESDMSREAFLLMACIKACG
GHWGLNLPVDVLRGSRSKKIIDAQFDKLPFHGLGKEMPANWWKALADQLISRDYLIETFR
DVYKTVRVGPKGVDFLNSCTPDHQPPLYLPSPTEMVGDMKGTDIVGEAGVDGLAPIKFEG
LCQEEAQFYKMLVEERMKIAKKTGTAPYAICGDLTLKRIALTRPSTRARLANIDGVNQHF
LITHGDCLLQSIQHLSKELNLALDGEPNTQTPTPRKVSTVPNNKKLLPAKFEAWRMWQED
GLTFHKIANFPGRAAPIKEQTVIDYLLEAAREGCPIDWTRFCEDIGLTRQLFTNIQDVVS
KVGKEKLKPIKTELPEEVTYSQIKAYLLVQEMGISVEGISSGHHHGGGVEGRPNHESLVD
NANGGSSPRKSKATISDLIGSANAERLPFGTDGSPKSRKRQKVDGPQVERSATVEASESS
ILRWLENFDDGVSLSDLLEHFSGSKEEAIVDLLNNLEGEFLIFRKNNLYRLM
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaatcctcaagcaatattttgggttttcgaaatttcgaccgtaccagaaagaa
attgtggagaagattttagatggaaaagattctttggtggttatggccactggcagtggc
aagtccttgtgctatcaggtaccaccattgattgccaaaaagacaactgtagttataagc
cctcttatttctttgatgcaagatcaggtaatggcattgaagcaacgaggtataagagct
gagtatctctcgagtgctcagactgaccgtagtgctcacagtaatgctgaaagtggccag
tacaatatactgtacatgactccagagaaggcttgcgttcttacaaccagtttctggtcc
agactgctaatttcaggaatatgtctcctggctgttgatgaagcacattgcatttcagag
tggggtcatgatttcagggttgagtataaacaattaggtaggctgcgggatgttcttcca
aatgttccatttgttggcttaacggcaactgccactgaaaaggttcgcattgacattata
aattcactgaagatgaaaaatcctcacataactattggttcatttgaccgtcaaaatctc
ttctacggtgtcaaatattccgatcgcagttcagcttttgtggatgagcttgtgaaggag
atttctaaatataggaacagcagaagttcaactatagtatactgtacaactgtcaaagat
gctgaacagattttcaagttccttcttgaggacggaattgaggctggaatataccatggt
caaatgtccaataaagcgcgtgaggagtctcacagggcattcatcagagatgaattttat
gtcatggttgcaactatagcatttggcatgggtatcgacaagcctaacattagacatgtg
atacactatggctgcccaaagagtctggaatcatattaccaggaaagtggacgatgtggt
agagatggcattccttcaacctgctggctgtattatgcaagaagtgactttgggaaagcc
gatttttactgttcagaagcacgcacagcagatcaaagaaaagcaattatggagtcattt
gtggcagcacaacgctattgtatgctgacaacttgtagaagaaagtatcttctggagtac
tttggagagaaatacggctctgtcaattgtggaacttgtgataattgcactagctcaaag
aatgagagtgatatgtctcgagaggcatttcttttaatggcttgcattaaagcatgtgga
ggtcattggggtctcaatctgccagtagacgttcttcgtggatctcgatccaagaaaatt
attgacgctcagtttgataagcttccattccatggccttggaaaagagatgccagcaaat
tggtggaaagctctagctgatcagttgatttcacgtgattatttgattgagaccttcaga
gatgtgtacaaaactgtaagggtcggaccaaaaggagtggactttttgaactcttgcact
cctgatcatcagcctccattatatcttccatcgcctacagaaatggttggtgatatgaaa
ggcacagatatagttggtgaggctggagttgatggtttggctcctattaaatttgagggg
ttgtgccaggaagaggcacagttctataaaatgctcgtagaggagagaatgaagatagcc
aaaaaaactggaactgctccatatgcaatatgcggtgatctaacattaaaaaggatagca
ttgacaaggccatcaactcgagcaaggctagcaaatatagatggtgtgaaccagcacttt
ctaattacacatggagattgtttgctacaaagcattcagcatttatcaaaagaattgaat
cttgctttggatggggagccaaatacacaaactcctacgccaagaaaggtttccactgta
ccgaacaacaagaagttattgccggcaaagtttgaagcttggagaatgtggcaagaagat
ggccttacattccataaaattgccaatttccccggtcgagcagctccaataaaagaacaa
actgtgatagattatcttcttgaagctgcaagagagggatgcccaattgattggaccaga
ttctgtgaggacattggattgacgcggcagctatttacgaatattcaggatgttgtgtca
aaagttggcaaagagaagctaaagcctatcaaaactgaattaccagaagaagtaacttat
agccagatcaaggcctacttgctggtgcaagagatgggaatatcggttgaaggtatatca
tctggccatcatcacggcggtggagtagagggtcgacccaatcatgaatcacttgtggac
aatgcaaatggtggtagttccccaaggaaatctaaagccacaatttctgatctcattggg
agtgcaaacgcagaacggctgccatttggtactgatggttcaccgaaatctcggaaacgc
caaaaagttgatgggccacaagtagaacgatctgctacggtcgaggcatcggaaagttct
atattacgctggcttgagaattttgacgatggggtttcactatctgatctcttggaacac
ttcagtggatcaaaggaagaggcaatagttgatctgctaaataatctggagggtgagttt
ttaatttttagaaagaacaatctgtatagacttatgtaa
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