Olea europaea var. sylvestris (wild olive): 111380438
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Entry
111380438 CDS
T05244
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111380438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111380438
03036 Chromosome and associated proteins [BR:
oeu03036
]
111380438
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111380438
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111380438
PBAF complex
111380438
GBAF(ncBAF) complex
111380438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
HCV_NS4b
Motif
Other DBs
NCBI-GeneID:
111380438
NCBI-ProteinID:
XP_022859776
LinkDB
All DBs
Position
3:65317..72073
Genome browser
AA seq
977 aa
AA seq
DB search
MEENRRDSIGTPPPVTSVTQSKPPEAPPSEQPTSRRRGGAHKRKSASINVGGGLSTQAIS
SKRQTREKPAPVPFPLIHHNGPFTRLRVQPNNNGVSVEPTERVGLEASVKTEERIEVNEN
WEALEAKIKAEYEAIRSRDANVHVVPIHAGWFSWTKVHPLEERMLPSFFNGKSESRTREL
YMEIRNWIIKNFRSNPSAQVELKDLAELTVGELDARQEVMEFLDYWGLINYHPFAHDGSD
TVGPDSDANASADADEPGKAGSLVEKLFRFEAEQSRTPVVRRFNLGTQATSSGLFPESVA
AEELGKSEGPSVEYHCNSCSEDCSRRRYHCQKQADFDLCANCFNNGKFDLDMSPSDFILM
EPAEAGGASGGKWTDQETLLLLEAIEIFRDNWSEIAEHVATKTKSQCILHFVQMPIEDAF
FNHNDETDATPKENGCPLSSNTDSAASKIDQNEDTSAHKDVGEKTGSPGDANDNHASCPM
EISKPDEEDNKSDVDPEDGESCALKALREAFEAVGSRPSPGERLSFAEAGNPVMTVAAFL
ARLVEPNIAAASVRSFLKSLSENSSSEQLAARHCFRLEDPTDNNKNSVDSEGAAAETIGL
EGQKDEDLRAEKQKVEKYDPVAGEISSQNDENDNENKNSATEEQKLVVSPSTKHRDKSSD
FGKEPERMINQGEAQTDPMIESSNPDLPDERLQKNAEGSAVSTSVIEIPPNAAKESGNGA
SSGETSQSKDPPNGDKLSSSGKEETEQLVATNSVTEKQESTGVEEAKECGNDKGEPLVKE
AKERGNDKRETSMKEGKARDNENKENSVTKVNLPIDKLKRVASTALSAAALKAKLLADQE
EDHIRELAALLIEKQLHKLETKFAFFNDMENVAMRVKERLERSKQKLVHERAQIIATRLG
ISASSARPMSQSLPASRVGMTVPNSVSRTLMGMTSLRPPVSRPMMALNPTSGSFMPATMA
GSSVQTNPDTLSFVGTK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaccgaagagactctataggaactcctccgccggttacttctgtaactcag
tcgaagcctccagaggctccgccttcggagcagccgacctcaaggcggagaggcggtgcc
cataagcggaaatcggcctccattaacgttggcgggggtttaagtactcaggcaatttcc
tccaagcgccagacccgagagaagccagctccggtgccgtttcctctaatccatcacaat
ggacctttcactaggttgcgggtgcagccgaacaacaacggtgtgtcggtggaacccacg
gagcgcgttggcctagaggcctcggtgaagaccgaggagcggattgaagtgaacgaaaat
tgggaggcgttggaggcaaagattaaggctgagtatgaagccattagatcgagagatgca
aatgtccatgtggtgcccattcacgccggatggttttcatggacaaaagttcatccccta
gaagagagaatgcttccctctttctttaatgggaaatcggagagtaggactcgtgaatta
tacatggagatacggaattggatcataaaaaattttcgttccaatcccagtgcacaggta
gagttgaaagatttagccgagctcacagttggagaattggacgctaggcaagaggtgatg
gaatttttggattattggggtttgattaattaccacccattcgcacacgatggatctgat
acagtgggtcctgattctgatgccaatgccagtgctgatgctgatgaaccaggaaaagca
ggttctttagttgagaaactctttcgatttgaagcagagcaatcacgaactccagtcgtt
cgccgatttaacttgggaacacaagccacgtcatctggactgtttcctgaatcagttgct
gccgaagaattggggaagtctgaggggccttcagttgagtaccactgcaactcctgttca
gaagattgctctcgcagacgctaccactgccagaagcaggcagattttgatttatgtgcc
aactgtttcaacaatgggaagtttgacttggatatgtccccatcggatttcattctcatg
gagcctgctgaagctggtggtgcaagtggtggaaagtggacagatcaagaaactctttta
ctccttgaagccatagaaatttttagagataactggagcgagattgctgaacatgtagca
acaaagacaaaatctcaatgtattttgcactttgttcaaatgccaattgaggatgcattt
ttcaatcacaatgatgaaactgatgcaactcctaaagaaaatggatgtccactttctagc
aatactgatagtgcagcctctaaaattgaccaaaacgaagatacttcagctcataaagac
gttggtgagaaaacaggaagtccaggcgatgcaaatgacaatcatgcttcatgtcccatg
gaaatttcaaagccagacgaggaggacaataaatcagatgttgatccagaagatggtgag
agctgtgcactgaaagcactcagagaggcatttgaagctgtgggttctcgtccttcacct
ggagaaagactatcgtttgctgaagccggtaatccggtgatgacagtggcagcattcctg
gcgcgattggtggaacctaatatagctgctgcatcagttcgtagctttttaaaatcacta
tctgaaaattcttccagtgagcagcttgctgcaagacactgtttccgattggaagatcca
acagacaataataagaattcagttgactcggaaggagcggcagctgaaaccattggtctc
gaaggacaaaaggacgaggatcttcgtgctgaaaagcagaaagtagaaaagtatgatcca
gtagctggtgagatcagctcccaaaatgatgagaatgataacgaaaacaagaattctgcc
acagaagaacaaaagctagtggtttctcctagtaccaaacacagagacaaatcttctgat
tttgggaaagagcctgagcgaatgatcaatcaaggggaagcccaaactgacccaatgatt
gaatcaagtaacccagatttgccagatgaacgtctacaaaaaaatgcagaaggatcggct
gtttctacatcagtgattgagattcctcccaatgctgccaaagagtcggggaatggagct
tcctcaggggagacttctcagtctaaagatcctccaaatggagataaattatcaagctct
ggaaaggaagaaactgagcaattggtagcaacgaattcagtgactgaaaaacaagaaagt
acaggtgtggaagaagcaaaagaatgcggtaatgacaagggagagcccttagtgaaagaa
gcaaaagaacgtggtaatgacaagagagagacctcaatgaaagaaggaaaggcacgtgat
aatgaaaataaagagaactcagtgaccaaagttaatcttcctattgataagttaaagcga
gttgcatcaactgctctatcagctgcagcgttaaaggcaaagctcctcgcagaccaagaa
gaggatcatattcgtgagcttgctgcattgttaatagaaaagcagttacacaaattggag
accaagtttgctttctttaatgatatggaaaatgttgccatgagggttaaggaacggttg
gaaaggtcaaagcagaagctggtccatgagagagctcagattattgcaacacgacttggc
atatctgcttcctcagctcgtcctatgtcacagtctttaccagccagcagagttggaatg
actgttcctaactcggtatcaagaaccctaatgggcatgacatccttaaggcctccagtt
tcaaggccaatgatggcattaaatcctacttcaggctctttcatgcctgcaacgatggca
ggaagttccgtgcaaactaaccctgatacgctttcctttgttggcacaaagtag
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