Olea europaea var. sylvestris (wild olive): 111381189
Help
Entry
111381189 CDS
T05244
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111381189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111381189
03012 Translation factors [BR:
oeu03012
]
111381189
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111381189
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111381189
Translation factors [BR:
oeu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111381189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
nSTAND3
ATPase
AAA_19
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
111381189
NCBI-ProteinID:
XP_022860705
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MHSRLSFFLARAARKSSSSLYSARSPPLSPNPRLRRVFSAYNNKCNAGDFFWLSRSHLSR
NLIGFVTIRREFCGYAAEQFSDDEYECDYENHPASSSVANIDEWKWKLSMLLRSENDQEI
VSRDKRDRRDFEQISNLAKRMGLYCDMYGKVVVASKLPLPNYRPDLDDKRPQREVVVPLS
LQRRVEGLLQEHLDRMVLNSEKVDDSSAKTEAVDQVEHVNTDENGDPFLDGSVMEKVLQR
RSLRLRNMQRTWQESPEGKTMLNFRNSLPAFREKERLLQAIACNQVVVISGETGCGKTTQ
LPQYILESEIESGRGAFCNIICTQPRRISAMSVAERVSAERGEPLGESVGYKVRLEGMKG
KNTHLLFCTSGILLRRLLSDRNLDGITHVFIDEIHERGMNEDFLLIVLKNLLPRRRDLRL
ILMSATLNAELFSNYFGGAPTIHIPGFTYPVKSHFLEDILEATGYKLTSFNQVDDYGQEK
MWKTQRQLAPRKRKNQITTLVEDALNKSNFESFNSRVNESLSCWTPDSIGFNLIEAVLCH
ICRKERPGGVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLIFERP
APNVRKIVLATNMAEASITINDIVFVLDCGKAKETTYDALNNTPCLLPSWISQASARQRR
GRAGRVQPGECYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGKFLSAALQ
PPEPLAVQNAIEFLKMIGALDENENLTHLGKFLSVLPVDPKLGKMLILGAIFSCFDPILT
IVAGLSIRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWRDAEREGSAYEYCW
RNFLSVQTLQAIHSLRKQFSYILKDAGLLDADGVIHNRLSHNQSLVRAIICSGLFPGIAS
VVHRETSMSFKTMDDGPVLLYANSVNARYQTIPYPWLVFGEKVKVNTVFIRDSTGVSDSI
LILFGGNLNHGAMDGHLTMLEGYVDFFMDPSLAECYVKLKEELDTLLQKKLQDPSMDIHK
EGKYLMLSVQELVSGDQCEGRFVFGRESKKPREPNDSSRFTKDGTNPKSLLQTLLMRAGH
SPPKYKTKHLKTNEFRALVEFKGMQFVGKPRRNKALAERDAAIEALAWLTHTSDNNREEE
DNSPPDVTDNMLKLLGKRRRSKRRPG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgaggctaagttttttcttggcacgcgccgctagaaaatcctcttcttcactc
tattctgctcgttcaccaccattgtcaccaaacccaaggttaagaagagtattttcagca
tataacaataaatgcaatgccggtgactttttttggttatctcgctctcatctctctaga
aatctaattggttttgtcacaattcggcgtgagttttgtggctacgccgccgagcagttc
tctgatgatgagtatgagtgtgattacgaaaatcacccggcatcatcgtcagtggccaac
attgacgagtggaaatggaaactcagtatgcttttacgtagtgagaacgatcaagaaatt
gtgtccagagataaaagggacaggagagactttgagcaaatatccaaccttgccaaacgg
atgggcctttactgtgatatgtatgggaaagtggtagttgcaagcaagttgccccttccc
aactacaggccagatctcgatgataagcggcctcaaagagaggttgttgtcccattaagt
ttgcaaaggagggttgagggtttgctacaggaacatcttgatagaatggtgctgaattct
gaaaaagtggatgactcttctgccaaaacggaggctgtggatcaggttgaacatgtaaat
actgatgaaaatggagatcccttcctagatgggtccgttatggagaaggttctccagagg
cgaagcttgcgcctgcgtaatatgcagagaacttggcaggagtcacctgaaggcaagacg
atgctgaatttcaggaattccctcccggccttcagggagaaggaaaggctccttcaagca
attgcatgtaatcaggttgttgtaatttctggagaaactggatgtggtaagaccacccaa
cttccccaatacattttggagtctgaaatagaatctggccggggagcattctgtaacata
atttgtactcagcctcgaagaatatcagccatgtctgttgcagaaagggtgtctgcagag
aggggagagcctcttggtgaatctgtgggctataaagtacgattagagggaatgaaaggc
aaaaatacacatttgctcttctgtacaagtggtattttgctccgcaggctcttgagtgat
cgcaacctggatggtataactcatgttttcattgatgaaattcatgagcgaggcatgaat
gaagacttcttgcttatcgtgttaaagaaccttctcccacgaagacgggatttgagattg
atcttgatgagtgctactctgaatgctgaattattttctaattattttggtggagcacca
acaattcacattcccggcttcacatatccagtaaaatcccactttctggaagatatattg
gaggcaactggatataaattgacatcatttaaccaagtggatgattatggccaagagaag
atgtggaaaacacaaagacagctagcaccacgaaaaaggaaaaatcagatcactactcta
gttgaggatgctctgaataaatcaaattttgagagttttaactccagggtaaacgagtca
ttgtcctgctggacacctgattctattggattcaatctcattgaggctgttttgtgtcac
atatgtcgcaaggaacgtccaggtggtgtcttagtgtttatgacagggtgggaggatatt
agttgtttgagggatcaactaaaagctcaccctctattaggggaccctaacagggtcctg
ctgcttacatgtcatggttcgatggcaacatctgaacagaaactcatattcgagagacca
gctcctaatgttcgtaaaattgtacttgccacaaatatggcagaggcaagtattacaatc
aatgatatcgtttttgtgcttgactgtggaaaagcaaaggagactacttacgatgccctg
aataatactccctgtttactgccttcatggatatcacaagcttctgctcggcaaagaagg
ggtagggctggtcgtgtgcagcctggtgagtgctaccatctatatccacgatgcgtttat
gaagcttttgccgaataccaacttcctgaacttctaagaactcctttgaactccctgtgc
ttgcaaataaaaagtttgcaagttggaagtattggaaaatttctatctgctgctcttcag
ccacctgaaccattggctgtccaaaatgctattgaattcttgaagatgataggtgcttta
gatgaaaatgagaatcttactcatcttgggaagtttttgtctgtgcttccagtggatcca
aaactcgggaaaatgctaattcttggtgctattttttcttgctttgaccctattttgacg
attgttgctggtcttagcatcagggatccttttcttttgcctcaagataaaaaggattta
gcagggacagcaaagtccagattctcggcaaaggactatagtgaccatatggctcttgtc
cgagcatatgaaggatggagggatgcagagagagaaggatcagcgtatgagtattgttgg
agaaacttcctctctgtccagactcttcaagccatccattctcttcgtaaacagttctcc
tacattctgaaagatgctggattactagatgcagatggagtgatacacaatagattgagt
cataatcaatcattggttcgtgctattatatgttctggcctatttcctggcattgcatcc
gtcgtgcaccgggagacatcaatgtccttcaagacaatggatgatgggccagtcttgctc
tatgctaattcggtgaatgcacgttaccaaacaattccgtacccatggctagtgttcggt
gaaaaagtaaaagtcaatactgtattcatacgtgattcaactggagtatctgattctatt
ttgatcctttttggtggtaacctcaaccatggtgctatggatggacatttgacgatgttg
gaaggttatgtagatttctttatggatcctagtttggcagagtgctatgtaaagcttaag
gaggagcttgacacacttttacaaaagaagcttcaagatcctagcatggacatccacaag
gaaggtaaataccttatgctctctgttcaggagctggtgtcgggtgatcaatgcgaaggg
aggtttgtttttggtcgtgaaagcaaaaagcctcgagagccgaatgacagtagtcgattt
acaaaagatggaacgaatcctaagagcttgctacagacgctgttgatgagggcaggtcac
tcgcctcccaagtataaaacaaagcatcttaagacaaatgaatttagggcgctggtggag
ttcaagggaatgcagtttgtgggaaagcccaggagaaataaagcccttgcagagagagat
gcagctatagaagcattagcctggttaactcacacatctgacaataatcgtgaagaagaa
gataattccccgcctgatgtcacagacaacatgctgaaacttctaggaaagcgcaggagg
tctaaacggcgtccaggttga
DBGET
integrated database retrieval system
