Olea europaea var. sylvestris (wild olive): 111381664
Help
Entry
111381664 CDS
T05244
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111381664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oeu04131
]
111381664
Membrane trafficking [BR:
oeu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111381664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
TPR_VPS8_2
Clathrin
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
WDR55
zf_RING_Vps8
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML
WD40
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_LRRK2
zf-RING_2
zf-RING_Vps41
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111381664
NCBI-ProteinID:
XP_022861231
LinkDB
All DBs
Position
Unknown
AA seq
1949 aa
AA seq
DB search
MEQSSMKVDLDSLLQSHGGVDSDSSDEVDSTLSYSKHRTVDEILLNNSSSSCSPSPPSSP
KLLHSHPSTSVVELNKFKSSTTSASFDSSSSSRIKSADENTAPSSFSLSRIVLPPLFING
AVSSQTKPGAALAAAAAASRSVPTPHAAAIKLRRANTSALQSVALEATAIVASVETSSSS
AASKDSEVGSETGSESHGLRVLENSSDHSEEVKLDVFQSAQAKVRLTETVGTIDDPTESA
QILTSDETSTGAATVDEHLTIGEQVSERLISESHISSTVENEKQLEFNENRVDSVLDEVN
ENKQVLSSLSNDNSDVNTEINYVDESNEIKDMAVPSPPSLISNDTISSDEIVSLMGEEEA
NDKGDVMDESRDVDDASSQYDAEDITEELGLKSESKRGRRKSQKKSQSSLKPLELAEELE
KKQAFKGMHYEEGVTSQPMRLEGVRRGSTVLGYFDVNANNTITHTISSQAFRRDHGTPQV
LSVNFNYIAIGMSKGTIVIVPSKYIPHQVDNMDAKMSVLGLQGDRTHVPVTSMCFNQPGD
LLFAGYGDGHYTVWDVQRTSALRVINDHKAPVVHMLYVGQDTQVTRQFNVVSGDSKGVVK
LIRFSVVPWLNRISYSKSMKLLDETTSRVVCASPLLSGEVHGGAHMSSQGSSAVSTGSIS
SMMGSVVEEGVVIFVTHQSALVAKVNPTVEVYAQIPKPDGIREGAMPYAAWRCISRSPGS
STENAPADTLEKLSLLAIAWDQKVQIAKLVKSDLKILEKWTLESPAVGLAWLDDQMLVIL
TLTRQLYLFAKDGNVIHQTSFAVDGLRGDDLISSHIYFTDTLGNPEKAYHNCVAVRGATI
YILGPEHLIVSRFLPWKERIEVLRKAGDWMGALNMAMTLYDGQSHGVIDLPKNLDDIQRS
IMPYLVELLLTYVTEVFSYISVACCNQNGTLDQSNEIKEQYTRVGGVAVEFCVHIRRTDI
LFDEIVSKFDEAQHKDTFLELLEPYILKDMLGSLPPAIMQALVEHYSEKGWLQRVEQCVL
HMDILSLDFNQVVRLCREHRLHGALIYLFNKGLDDFRAPLEELLVVLRNSERESAASLGY
RMLVYLKYCFQGLAFPPGHGNLSPTRLPSLRKELVQFLLEISSAQNAWTDRNLPSNGACP
NLLHLLELDTEATLDVLRFAFPEEDEIGHFSEGSMNLELAEVNDSMDESQILVQKVVDVL
ADILDGSYFQTGSSINSDDINSREIWPSKKDAGHMYDFTAYHVACGRANVSNKILTQILE
YFTSEINISQSLSGQTTEIIRRREKQLLALVEVVPETRWDTPYLLHLCAKAQFYQVCGCI
HAIKHQYVAALDNYMKATDEPVLTFSFIHIMLKQLSEEERDAFESAVISRIPDLLKLSRE
GTYFLIVDHLSGQSQYILSALRSHPESLFLYLKTVIEVNTTGNLNLSSLKNDNNLYFPSA
RRPKQQSSSVEAYLQTISGFPKLLHNSSVQITDEMTELYLELLCQYERKSVLKFLETSES
YRVEHCLRLCQEYRITDAAAFLLERVGDVGSALLLVLSDLNDKMIVLNAAIEDGLSGASL
DHLNAVLKRKEVIEILDIVHACISLCQRNSPRLDPDESEYLWFQLLDSFCKPLMDSDGGS
TNSKSKAPRETLDGSFGHQGDEEGSKIKWKFSKSHKGARIMTKLISMFIKEIVEGMIGYV
QLPRIMSKLLSDNGNQEFGDFKLTILGMLGTYDFERRILDTAKSLIEDDTYYTLSLLRKG
ASHGYSPWSTVCCICNGLLAKSPDDSGIQIFSCGHAIHLHCELPENGASVRGSSTGCPIC
MPRKKAQKSSSISLFAQNGLVSKSSSRSQQPHGTLASHPHDYDSFENSYGSQPVSRFELL
NNLQKDHKSTQMENRPPLRLAPPAIYHEKIIKKRSDDLEGESSSSSSRGLSKTEKPTRSR
QLKDVKVKGSLVRFPLKSNIFGKEKTSKR
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatcctcaatgaaagttgatcttgactctcttctccaatcgcacggcggagta
gattccgattcttccgatgaggtggattccaccttgtcttatagtaaacaccgcacggtc
gatgaaattcttttaaacaattcctcatcttcttgctctccctctcccccttcttcccct
aaattattacattcacacccttctacatctgtggttgaactcaacaaatttaagagttca
actactagtgctagctttgatagctctagtagcagtagaattaagtcagcggatgagaat
actgctcctagttctttttcgttgagccggattgttttaccgccactattcatcaatggg
gcagtcagctcccaaactaagccaggggctgctctggcggctgcagcagcggcatccaga
tcagttcctactccccacgcggctgccatcaagttgagaagggccaataccagtgctctg
cagagtgtggctttggaagccactgctattgttgctagtgtagaaacgtcatcttcatca
gcagcttccaaagattctgaggtgggttctgagactggttctgagagccatggcttgcgt
gttcttgaaaacagtagtgaccactcagaagaggttaaattggatgtttttcaatctgca
caagctaaagttagattaaccgagactgtaggtactatcgacgatcccactgagagtgct
caaattttaactagtgatgaaacttcaactggggctgctactgtggatgaacatttaaca
attggggagcaagtttctgaaaggctcatttctgaatcccatatcagctctactgttgaa
aatgaaaaacagcttgaatttaatgagaatagggtggattcagttttggatgaagttaat
gaaaacaaacaagtgttatcttccttatccaacgacaacagtgatgtaaatactgaaatt
aactatgttgatgaatccaatgaaattaaagatatggctgttcctagtccaccttcttta
atttccaacgacacaataagttcagatgaaattgtgagtttaatgggagaagaagaagca
aatgataagggggatgtaatggatgaatctagagatgtagatgatgctagttcgcaatat
gatgctgaagatattactgaagaattaggtttaaagtcagaaagtaagaggggaaggaga
aagtcacaaaagaaatctcaatcttccttgaagccgcttgaattggctgaagaacttgag
aagaaacaggcatttaagggaatgcattatgaagagggtgttacttctcaaccaatgagg
cttgagggtgtccgcaggggctctactgtgttgggttactttgatgtcaatgccaacaat
accattactcataccatctcatcacaagctttccggcgagatcatgggacccctcaagtc
ctgtcagttaattttaactacattgcaattgggatgtctaaaggaactattgtcatcgtg
cccagcaaatatattcctcatcaagttgacaacatggatgcaaagatgtcggtgcttgga
ttacaaggagatagaactcacgttccagtaacttccatgtgctttaatcagccaggagac
ttgctttttgcaggatatggtgatgggcactacactgtttgggatgtgcagaggacctct
gcacttagagtgattaatgatcataaagctccagtagttcacatgctatatgtagggcag
gatactcaggttacacgtcagtttaatgtggttagtggggatagtaaaggtgtggttaag
ttgattcgtttttcagtggttccatggctcaatagaatttcttactccaaatcgatgaag
cttctagatgaaacaactagcagagtagtgtgtgcatctccattactgtcaggtgaagtt
catggaggtgcacacatgtcctctcagggtagcagtgcagtttctacagggagtattagt
agcatgatgggaagtgtggttgaagaaggtgttgtcatctttgtcacgcaccaatctgct
ctagtggcaaaagttaatcctactgtagaagtatatgctcaaattcctaaacctgatggc
atcagggaaggcgccatgccttatgctgcatggagatgcatttcgcggtcacctggttct
tccaccgaaaatgcacccgctgacacactagaaaaactgtcactgcttgcaattgcttgg
gatcagaaagttcagattgctaagctggtgaaatccgatctaaagatacttgaaaagtgg
actctggaaagtccggcagtaggcctggcatggttagatgatcagatgttggtgattctc
actttgacaagacaactctatttgtttgcaaaagacggaaatgtgattcatcagacaagc
tttgctgtggatggattgcgaggggatgatctcatttcatcacatatctactttactgat
actcttggtaaccctgaaaaggcttatcacaattgtgtagctgtaaggggggctactata
tacatacttgggccagagcatcttattgtttcccgctttcttccctggaaggaaaggatt
gaagttttgaggaaagcaggtgattggatgggcgcattaaacatggcaatgacactttat
gatggccagtcacatggtgttattgaccttcccaaaaatttggatgacatacagaggagt
attatgccctatttagtggagttgcttctgacgtatgtaactgaggtattttcctatata
tcagtagcatgttgcaaccaaaatgggactctggaccaatccaatgagattaaggagcaa
tacactcgtgttggtggcgttgcagttgagttctgtgtgcatatcaggagaaccgatatc
ctcttcgatgaaattgtttcaaaatttgatgaagctcagcataaagatacattcttagag
cttttggagccatatattttgaaagatatgttgggatcccttccacctgcgattatgcaa
gctttggtggagcattatagtgagaaaggttggttgcaacgagttgaacaatgtgttctc
cacatggacattttgtccctggattttaatcaggttgtacgcctatgcagggagcacagg
ttgcatggtgcactgatatatttgtttaacaaaggtctagatgattttagggcacctcta
gaggagctcttggttgtactacgaaatagcgaaagagagagtgctgcttcccttgggtat
aggatgcttgtttatctgaagtactgttttcagggtcttgccttccctccaggacatgga
aacctttctcctacacgcctgccatctcttagaaaagaacttgtgcagtttctattggag
atttctagtgctcaaaatgcatggacagatagaaacttaccatcaaatggagcttgtcca
aacctgctacatctgttagaattggataccgaagccactctagatgttttgagatttgca
tttccagaggaagatgaaataggccacttttcggagggatcaatgaacttggagttagct
gaagtaaatgattcaatggatgaaagtcaaattttggttcagaaagtagtagatgttctt
gctgatattctagacggaagttacttccaaacaggcagttctatcaacagtgatgacatt
aactctagagaaatctggccttcgaagaaagatgcgggtcacatgtatgacttcacagca
taccatgtagcctgtggaagagccaatgtgtcaaataagatcctaactcaaattttggag
tactttacatcagagataaatatttcacaaagtttgtcagggcaaacgacagaaataatt
agaagaagagagaagcaactacttgcacttgtagaagtggttcccgagactcgctgggat
actccgtacttgttacatttgtgtgcaaaggctcagttttatcaggtttgtggctgcatt
catgccatcaagcatcagtatgttgctgctttggataactatatgaaagctacggatgag
cccgttctcaccttttcctttattcatattatgctgaaacaactcagtgaagaagaacgt
gatgcttttgaatcagccgttatttctcgaattcctgatcttctcaaattaagcagagaa
ggaacttactttctgattgttgaccatttatctggtcaaagtcaatatattttgtctgcg
cttcgctctcatccagaaagccttttcctctatctgaagacggttattgaggttaacaca
actggtaacctgaacctctcttctttaaaaaacgacaataatttatattttcccagtgca
agaagacctaagcagcagtcatctagtgttgaagcttatctacaaacaatatccggcttc
cctaaacttctgcacaacagttctgttcagattactgatgaaatgacagagctatatctt
gagctattatgtcagtatgagcgcaaatccgtactgaaattcttggagacttctgaaagc
tatagggtcgaacactgtttacgtttgtgccaggaatatcgaattacagacgcagctgca
tttttattagaaagagttggagatgttggaagtgctttgttgctcgttctttctgatctt
aatgataaaatgattgtgcttaatgctgctattgaagatggactttctggtgctagtctg
gatcatcttaatgccgttttaaagagaaaagaagtcattgaaattcttgatattgtgcat
gcttgtatcagtctatgccaacggaacagcccccgattggatccggatgagtccgagtat
ctctggtttcagttgcttgattcgttttgcaagcctctgatggattcagatggtggtagt
acaaattctaaaagcaaagcaccgagggaaactcttgatggatctttcggtcatcaggga
gatgaagaagggagcaaaattaaatggaagttctccaagtctcataaaggtgctcgcatc
atgacgaaactgatttccatgtttattaaagagattgttgagggcatgatcggatatgtt
cagctcccaaggataatgtcaaaacttctttctgataatggaaaccaagaatttggcgat
ttcaaacttacaatattagggatgcttgggacatatgattttgagagaagaattttggac
actgccaaaagtttaatcgaagatgatacatactatacgctgagtttactcagaaaggga
gcttctcatggttattccccctggagcacagtttgctgcatatgtaatggcctactcgcc
aaaagcccggatgattctggaattcaaattttcagttgtggtcatgcaatacatctccac
tgtgaacttccggagaacggggcatcagttaggggctcgtctactggatgtcccatctgc
atgcctaggaagaaagctcaaaaatcaagcagcatatcattgtttgcacagaatggacta
gttagcaagtcatcatcaaggagccagcaaccacatgggacattagcttcgcatccgcac
gattacgattcttttgagaactcatacggttctcagccagtgtcgaggtttgagttattg
aataatcttcagaaagaccacaagtcgacacagatggagaacaggcctccattgaggctt
gcaccacccgcaatttaccatgaaaagattataaagaaaagaagtgatgatttagaagga
gaaagcagcagcagcagcagcagaggtctttccaaaacagaaaagccaactaggagcagg
cagctcaaggatgtaaaagtgaaaggatccttggttcgattccctttgaaatcgaatata
tttggtaaggagaagacgagtaagaggtga
DBGET
integrated database retrieval system
