Olea europaea var. sylvestris (wild olive): 111381976
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Entry
111381976 CDS
T05244
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111381976
Transcription machinery [BR:
oeu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111381976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
111381976
NCBI-ProteinID:
XP_022861587
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MMATTAVIGLSTGKRLLSSNFYYSDFVEKLAGTSYQHQVLPSTKNVITAKKSSNYGPTFL
SDRNPQSIRAVKEHVDTASNPYAVEEPLPQGEETSDPDYLVDALLLLQKFMLEKQWNLST
DMPSEKGRKKVQVTGSGTSARRRRIDSRRKLIFRRSSTTAQIGKSKQLRSVISPELLQNR
TKGYIKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCDPSDEQLATSLRISR
AELQSEFMECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSS
KGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKAKLEEKGITPSVDRI
AECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADTRIENNPWHEVDEW
ALKDEVDKLLSSTLREREQEIIRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALEKL
KHAARKRRLDAMLLKF
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatggccactactgcagtaattggacttagcactggtaaaaggctcctcagttctaac
ttctactactccgatttcgttgaaaagcttgccggaaccagttatcagcatcaggttctt
ccttcaacaaagaatgtgattacagctaaaaagtcatcaaattatggcccaacttttctt
tcggatcgaaatccacaatctatcagggcagttaaagagcatgtagacactgcctctaat
ccttatgctgtggaggagccactgcctcagggagaagaaacctccgaccctgattacttg
gtggatgctctccttttactgcagaagtttatgcttgaaaagcaatggaatctttcaact
gacatgccgagtgagaaaggccggaagaaagtgcaggttactggttctgggacatctgct
agacggaggagaattgattctcgaagaaaacttatcttcaggagaagttcgactactgcg
caaattggtaaaagtaagcagttaaggtcggttatcagtccagagcttcttcagaatcgt
acaaaaggctatataaagggtgttgtaagtgaagaattactcacccatgtggaagtagtt
caactatccaaaaaaattaaagctggtctgttattggaagagcacaaatcaagattgaag
gagagattgggatgtgatccctcagatgagcaacttgcgacttccctgagaattagtcgg
gctgaattacagtcagaattcatggagtgctcattggcaagagagaagctgacaatgagc
aacattcgtcttgtcatgtctattgctcaaagatatgataacatgggtgcggaaatggca
gaccttattcagggcggtttgattggattactcagaggaattgagaaatttgattcttcg
aagggatataagatctcaacttatgtttattggtggattcgacagggtgtttcaagagct
ttagtgaggaattcaagaaccttaagattgcctacccatctacacgaaagactaagtttg
attcgaaatgcaaaggccaaactggaagagaaaggaattactccatcagttgatagaatt
gctgaatgtctaaacatgtcacagaaaaaagtcaggaatgccactgaggctatcagcaag
gtattctcactcgacagggaagcattcccctcgttaaatggtcttccgggagaaacactt
cacagttacattgctgatactcgcatagagaataacccatggcatgaagttgatgaatgg
gctcttaaggatgaagtagataagctccttagttcaactctaagggagcgagagcaagag
attatccgtctttactatggtctggacaatgaatgtctcacatgggaagatatcagcaga
aggattggtttgtcgagggagagagttcggcaggtgggattggttgctcttgagaaatta
aaacatgctgcaaggaagagaagattagatgccatgctgcttaaattttga
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