Olea europaea var. sylvestris (wild olive): 111382502
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Entry
111382502 CDS
T05244
Name
(RefSeq) endoribonuclease Dicer homolog 3a
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oeu03036
]
111382502
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111382502
microRNA pathway
RISC loading complex
111382502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
PAZ
ResIII
Helicase_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
111382502
NCBI-ProteinID:
XP_022862271
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MSTENPKRHFIPFSSFVKRIWDAPNSIVRMEVQDEITLNPLKRCFEDMDSKPQTGDETSI
PSEYERKVYEVAMRRNTIAVLENGAGKTSIQTMMIKEIGKTLKKNKGEKKLIIFLTPTVS
LVHRQYEEIKSHTELEVEEYYGAKGVDEWNVKTWEKEVNEHDVLVMTPQVLLNALRKGFL
SFQVLCFIILDECHFATRKHPYAKIMKEFYHKSSNRPKIFGMTASPGIRNGVFSNGECQD
HISELESLLDSQVYTIEDRVERKEFILMANQNSRLYDPATSSNLELKEELESSRSKVYTI
EDRMEPKEFIPLANQNCRLYDQDLPSNLELKKKLESSCSKVYTNEDRTKLKEFIPMAKQN
ILFCLENLGLLCAHEAVKVCLENAPDVQKECVFYREGALRCVYFLEEVLSTFEESLPEDH
EKLQDVRYSGLEAIARGQISSKLHELLEIFRSFEKAREVSCIIFVERIITAKVIERFLKK
NTDLSHLTVSWLTGSNSSGDELALKIQRETLESFQCGKVNLLFATGNVEEGMQVPKCSSV
ISFDIPESVRRFVWSKSRACQDDSQYILMLERGNKNQIDKMFNLVQSEYSMTDKAITRDT
DGSFTKASATKEVPAYIVEVTGASVAANSSISLVHRYCDKLPRENNVILKPTFECFQEGS
FYRCKLVLPPSAPFQTIIGPESGSRHLSKQLVCLDACKKLHMMGALNDHLLPVNEEPPQN
DSTLKGKVLTSGAGTTKRKELHGTTCVRKLSGNWGDKDDGACFHAYKMEFSCSIAEVHYS
SFLLLLESKLDDDVGNNQVDLFLLKKFVRCFVSFHGELYLDSQQVAKAKCFQELFFNGLF
GKLYVKLSGKKRFLLETKESLWDPLNMYLLLPLESVDKPTGKPLDINWTGIESCVSVVEF
LKKNAWLKILEPKDDCENSLIHSNDSVTTKFNGHVIELANKSVPVDSLKEMVVVAIHTCR
IYSIVHAVDNTSAESPFEAEDTNFLSYADYFHKKYGIVLKHPEQPLLLLKQSHNSHNLLV
DFSKEGGNKSKNKWTAGVEQQHAHMPPELLVGTDIRTDILKPFYLLPSIMHRLESLMLAS
QLRDEIAGPAGDLHITSSLILEALTTLRCNESFSMERLELLGDSVLKYTVSCHLFLKDSK
LHEGQLSSRRSRAVCNATLHKLGTNRTLQEYIRDCAFDPRQWTASGQRSIWRSPCDHGVD
TREVPMDDKFVTEDEKLVVGKSCDKGHRWMGSKTVSDCVEALIGAYYVGGGLNAAFQLMK
WFSIGAEVEPSWVDDVIKTASLRSYTPKAKDLKLLESKIGYEFSVKGLLLEAITHEHEQG
VDYCYQRLEFLGDSVLDILVTWHLYLSHPDVDPGELTDLRAASVSNDNFAIAAVKHNLYS
HLQHGFSSLGSQISEYVKSTSDLSKTSILTQAIKAPKVLGDLVESIAGAMLIDTNLDINK
VWKVFKPLLSPIVTPDNLELPPCRELIELCDSLGYFIKVNYTLKGNTMNAELKVQLEDVM
LLGHGSGHDRKAAKGMAAVDLLKQLEGRGIVSSKRKKLGTNDVDDSSRGLDGIIISQTHN
QTSEPPQKKLKFVTPVMPPINMNKGGPRSSLFDLCKRLQWPLPTFQTYEEKSKTPFIIGD
KKGFNKFESRIKLIIPDFGVIELTGEGRTDKKASFDSAALLMLYELERQEKVIISEE
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagagaatccaaaacgacactttattccgttttcaagcttcgtaaaacgcatt
tgggatgcccctaacagcattgtgagaatggaggtccaggacgaaatcacgttaaaccca
ttaaaaagatgttttgaagacatggactccaagccccaaacaggcgatgaaacctctata
cctagcgaatatgagaggaaggtgtatgaagtggcaatgaggaggaatacaatagcagtg
ttggagaatggggctgggaaaacctcgatacaaactatgatgatcaaagaaattgggaaa
actttaaagaaaaataagggtgaaaaaaagttgattattttcctaacacccactgtttct
cttgttcatcggcaatacgaggagataaaatctcacacagagcttgaagtggaagaatac
tacggagccaaaggggttgatgagtggaatgtcaagacttgggagaaggaagttaatgag
catgatgtgttggttatgacacctcaagttttgttaaatgctttaaggaagggattcttg
agttttcaagtattatgttttattattctagatgaatgccattttgctacccgtaaacat
ccttatgcaaagattatgaaggaattttatcacaaatcttccaaccggcccaagattttt
gggatgacagcttctcctgggatcagaaatggcgtcttttccaacggagaatgtcaggat
cacatttcggagcttgaaagtctcttagattcccaggtatatacaatcgaggacagggtg
gaaaggaaagaattcatcctcatggcaaaccagaattccagactttatgatccagccaca
tcttccaatttggaattaaaagaggaattagaatcctcacgttctaaggtatatacaatt
gaggacaggatggaaccgaaagaattcatccccttggcaaaccagaattgcagactttat
gatcaggatttgccttccaatttggaattgaaaaagaaattagaatcgtcctgttctaag
gtatatacgaatgaggacaggacgaaactgaaagaattcatccccatggcaaagcagaat
attctgttttgccttgaaaatctcgggcttctttgtgctcacgaggctgttaaagtctgt
cttgaaaatgctccagatgttcagaaagaatgtgtattttaccgtgaaggagctttgcgt
tgtgtatattttcttgaagaagtgttgtcaacatttgaagaatcattgccagaagatcat
gagaaacttcaggatgttcgttatagtggtttggaggctattgccaggggccaaatatct
tcaaagctgcacgagcttctcgaaatttttagatcattcgagaaagctagagaagtctcg
tgcatcatatttgttgaaagaataattactgctaaagtaattgaaagattcttaaagaaa
aatacagacttgtcacatcttactgtttcatggttgactggaagtaactcttcaggtgat
gaacttgctctaaaaatacaaagagaaaccctggaatcattccaatgcgggaaagtcaat
cttttgttcgctactggcaatgttgaggagggaatgcaggtgcccaaatgttcctctgta
ataagctttgatataccagagtcagtccgtaggtttgtttggtcaaagagccgagcttgt
caagatgattcacaatatatcttgatgctagagaggggaaacaaaaatcaaatagataaa
atgtttaatcttgttcagagtgagtattctatgactgataaagccataacaagagacact
gatggttcttttacaaaagcttctgctacaaaggaagtacctgcatacattgtggaggtg
actggagcatcagtagctgcaaattctagcatcagccttgtacatagatattgtgacaaa
ctccctagagaaaataacgtcattctcaagccaacttttgagtgcttccaggaggggagc
ttttatagatgtaaactggttctgccacccagtgcaccctttcaaactatcatcggtcct
gaatctggaagccggcatttatccaaacaacttgtttgcttggatgcatgtaagaagttg
cacatgatgggggctctcaacgatcatcttcttcctgtcaatgaagagcctccacagaat
gattccaccctgaaaggcaaagtgttaacttctggtgcaggaacaacgaagaggaaggaa
ttacatgggacaacctgtgtgcgcaagttgtctgggaactggggagataaagatgatggt
gcctgttttcacgcatacaaaatggaattctcttgtagcattgctgaagtgcattattcc
agttttcttctcttacttgaatcaaagttggatgatgatgtgggaaacaaccaagtggat
ctattcttgctcaaaaagtttgttagatgttttgtttctttccatggtgaactatatctg
gattctcagcaggtggcaaaagcaaaatgcttccaggagctatttttcaatggtttattc
ggaaaattgtatgtcaaattatcagggaaaaaaagatttttacttgagaccaaggaatca
ttatgggatcctctaaatatgtatttgcttttacccctggagtcagtagacaaacctact
ggcaaaccactggatatcaattggactggaattgaatcttgtgtttcggtggtggaattt
ttgaagaaaaatgcttggctaaaaattcttgaaccgaaggatgattgtgaaaattctcta
attcactcgaatgattcagttacaactaaattcaatggccatgtcattgagttggccaat
aaatctgttcccgtagacagcctcaaggaaatggtggttgtggccatccatacttgcaga
atttattctattgtgcatgccgttgataacacatccgctgaaagcccatttgaagcagaa
gataccaattttctgtcatatgctgattattttcacaaaaagtatggaattgttttaaag
catcctgaacagcctctgttgcttctgaagcaaagccataactcacacaatcttcttgtg
gatttcagtaaggaaggtggaaataaatccaaaaataaatggacagctggtgtagaacaa
caacatgctcacatgccgccagaacttttagtaggcactgatattaggaccgacatcttg
aagccattctaccttctgccctcaataatgcaccgactggaatctctgatgttggccagc
cagcttagagatgaaattgcaggccctgctggcgacttacatataacaagctccttgatt
ctggaagctctcactactctaagatgtaatgaaagtttttccatggagcgcttggagttg
cttggagattcagttttgaagtatactgttagctgccacctttttcttaaggattccaag
cttcatgaaggacaattatctagtcgtcgttcaagggctgtttgtaatgcaactctacat
aaattgggaactaatcgcaccttgcaggaatacatacgtgattgtgcatttgatccgcgt
cagtggactgcttccggacaacgttctatctggcgttctccatgtgatcatggggtggat
accagggaagtgcccatggatgataaattcgtaactgaagatgaaaaactagttgttgga
aagagttgtgataaaggacatcggtggatgggttcaaaaaccgtctctgattgtgttgaa
gcacttattggggcatactatgtaggcggcggcttgaatgccgcttttcagttgatgaaa
tggttcagcataggtgctgaagttgagccttcgtgggtagatgatgttattaaaacagca
tcactccgttcttataccccaaaagctaaagatcttaaattactagagtcaaaaattggt
tatgaattctccgtgaagggattgttgctagaagccataacacatgaacacgagcaaggt
gttgactactgttaccagaggcttgaatttctaggcgactcagtgttggacatacttgtt
acgtggcatctttacctaagtcacccagatgttgatccgggggagttgacagacttgagg
gctgcctccgttagtaatgacaattttgccattgctgctgttaaacataatctttactcg
caccttcaacatggattttcaagtcttggaagtcaaatatcagaatatgtaaagtccaca
tcagatttaagcaaaacctcaatattaactcaagccataaaagctcctaaggtacttggg
gacttggtggaaagcatcgccggtgcaatgcttatagacaccaaccttgatataaataaa
gtctggaaagtctttaagccgctattgtctccaatagtgactcctgataatctagaactt
cctccatgtcgtgaattgattgaattatgtgactctcttggctactttattaaagtcaac
tatacgctgaaagggaacacaatgaatgcagaacttaaggtacaacttgaagatgtgatg
ttgcttggacatggatcaggacatgacaggaaagctgcaaagggtatggcagctgttgat
ctgttgaaacaattggagggaagaggaattgtatcttccaagcggaaaaagctagggacc
aatgatgttgatgattcttcccgaggcttagatggcattatcattagccagacacacaat
caaacttctgaaccgccacaaaaaaagctgaagtttgtcaccccagttatgccacctatt
aacatgaacaaaggaggacctcggtcctcactttttgacctctgcaaaaggctacaatgg
ccattgcctactttccagacatacgaggaaaaatccaaaactccatttataattggtgac
aagaaaggcttcaataagtttgaatcacgtatcaaattgattattcccgacttcggtgtt
atagagttgacaggcgagggaagaacagataagaaggcttcatttgattccgctgcactt
ctcatgctttatgaactcgagagacaggaaaaggtcatcataagcgaagaatga
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integrated database retrieval system
