Olea europaea var. sylvestris (wild olive): 111383020
Help
Entry
111383020 CDS
T05244
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111383020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111383020
03012 Translation factors [BR:
oeu03012
]
111383020
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111383020
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111383020
Translation factors [BR:
oeu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111383020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
dsrm
HA2_N
AAA_19
AAA_22
nSTAND3
ATPase
NACHT
AAA_11
T2SSE
PhoH
Motif
Other DBs
NCBI-GeneID:
111383020
NCBI-ProteinID:
XP_022862841
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MTWTFTAFLGSPSCLRRYSVELSSIHFNSAVGSGGENPTRQFFFYPAPSSSISGWMYPSS
LQFISYNFYPKSLNPLSSISPPPHLQFKMKDQPTPSNSPSLGQLYLPPNHRLRSVITTPS
ATFYPIKDSVPTTLSTNCNIHNRSSFPHFGVNDRNDNNKNSNNPYPNLPPHHYKQQLQEK
KSLHYKVSEAVSDYEIECLAHPGASTWDDVDGWKWKLTTLLHNKDKQELVSRDKRDRRNY
GQIAALASRMGLYSHLYTKVVVVSKVPLPNYRFDLDEKRPQREVILPPGLQRRVDKHLGE
HISQKPKGMNAFSRSSSDCNITTDDGLFEQPEALPPSKVAMEKFIWRRSQQIQREQLIWQ
LAYILRNTLIFLRLGLLSWSPMLLHPFEQSPEGRKMMEFRRSLPAYKEKDAILSAILQNQ
VVIISGETGCGKTTQIPQFILESEINSVHGAMCNIVCTQPRRISAMSVSERIATERGEKL
GDTVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLL
IVLKDLLPRRPELRLILMSATLDAELFSSYFGGAPMVHIPGFTYPVRTHFLENILERTGY
QLTPYNQIDDYGMEKMWKMSKQAPRKRKSPIVSAVEEALKAADFKDYSAQTRESLSCWNP
DCLGFNLIEYLLCYICENEGPGAVLVFLTGWEDINSLKDKLQGHPVVGDTSRVLLLACHG
SMASEEQKLIFDKPVDGIRKIVLATNIAETSITINDVVFVIDCGKAKETSYDALNNTPCL
LPSWISKVSAQQRKGRAGRVQPGECYHLYPRCVYDAFADCQLPEILRTPLQSLCLQIKSL
KLGSISEFLSRALQSPEYLAVQNAIEYLKIIGALDENENLTVLGRYLTMLPMEPKLGKML
ILGAILNCLDPMLSVVAALSVRDPFLAPMDKKELAEAAKAQFSRDYSDHLALVRAFEGWK
VADRDLAGYKYCWKNFLSAQSMKAIDSLRKEFYSLLKDIGLVDSNPVNYNTWSYDEHLLR
AIICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNARDSRIPYPWLVFKEKIKVNS
VFLRDSTAVSDSVLLLFGGGISKGDMDGHLKMLGGCLEFYMEPATAELYQSLKRELDEFI
QTKLLYPKMDIHSCHELLSAIRLLISEEQCGGRFVFNRQIVQPSKPSIVAEAPAFIPRSE
SGPGGDNSKSQLQTLLTRACRAAPVYETKWLKNNQFQSTVEFNGMQIMGQPFNNKKQAEK
DAAAEALQWILGRNQAGHDYVDHVSMLLKKSKKDHK
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggacgtttactgcatttttaggctccccatcttgcctccgccgctacagtgtc
gaattatcttccattcacttcaactcagccgttggctccggcggcgaaaacccgacccga
caattttttttttatcctgctccgtccagttccatttccggttggatgtatccttcttcc
ctccaatttatctcttacaatttctacccaaaatccctgaaccccctttcgtccatttct
ccaccacctcacttacaattcaaaatgaaggaccagccgacaccgtcgaattcgccgtca
ctcggccaactttatctgccgcccaatcaccgccttcgctctgtcatcactacaccctcc
gccaccttctaccccattaaggattccgtgcctacaactttaagtactaattgtaatatt
cacaaccggagctcatttcctcatttcggcgttaatgataggaatgataataataagaat
tctaacaatccttaccctaacttgccgcctcatcattacaagcaacaattacaggagaaa
aaatcgctgcattataaggtgtcagaggcagtttccgattatgaaatcgaatgtttggca
catccaggtgcttccacctgggatgatgttgatggctggaaatggaagttaactactctt
ttacataataaggataagcaagaattagtatcaagagataaaagggataggcgcaattat
ggtcaaatagcagctttagcaagcagaatgggtttatatagccacctgtatacaaaagtg
gtagttgtcagtaaggttccattgcccaactatcgatttgatcttgatgaaaagcgtcct
caaagggaggtgatcttacctccaggcttgcaaaggcgtgtggataaacatcttggagaa
cacatttcccaaaagcccaagggcatgaatgcattttcacgatcaagtagtgattgcaat
atcactaccgatgatgggctttttgagcaacctgaggcacttccacctagcaaggttgcc
atggagaaatttatttggcgaaggagtcagcaaatacaaagggagcaactgatttggcag
cttgcctacatcttgagaaacacactaatattcttgcggttggggttgttgagctggtct
ccaatgctattgcatccctttgagcaatctcctgaaggcagaaagatgatggaatttcgt
cgtagtcttcctgcttacaaggagaaagatgcaatattaagtgccattttgcagaaccag
gttgttatcatatctggtgaaactggttgtggaaagaccactcagattccccagtttatt
ctggagtctgagattaactcagttcatggagcaatgtgcaatatcgtatgtactcagccc
agaaggatatctgcaatgtctgtatcagagagaattgccactgagagaggggagaaattg
ggggatacagttggatataaagttcggctagagggtatgaaaggaagggatacccacctc
ctcttctgcacaacaggcattttgctgagaaggttactagctgatagaaacttgaagggc
gtaacacatgttatcgtggatgagattcatgaacgtggaatgaatgaagattttctgctt
attgttttgaaagatctactacctcgtcgaccagaactaaggctaattctgatgagtgca
accttagatgcagaactcttctcatcatattttggtggggctccaatggtccacattccg
ggtttcacttatccagtacgaactcattttctagaaaatattttggaaaggacgggatac
caattgacaccatataatcaaattgatgattatgggatggagaagatgtggaaaatgagt
aaacaagctccaagaaagagaaagagcccaattgtttctgctgttgaggaggcacttaaa
gctgctgatttcaaggattatagtgctcagacacgggaatctttgtcttgctggaatcct
gattgtctaggtttcaacctcatagaatatcttctgtgctatatatgcgagaatgaaggg
cctggtgctgttttagtttttctgaccgggtgggaggacataaactccttgaaggataag
ctgcaaggtcatcctgtagtaggagatactagtcgagttttattgcttgcatgccatggt
tccatggccagtgaggagcagaaattaatatttgacaagcctgtagatggaataaggaag
atcgttctagctaccaatattgctgaaaccagtattactattaatgacgtggtttttgtt
attgactgtggaaaggcaaaagagacgtcatatgacgctctaaacaatactccttgtctg
cttccttcttggatttccaaggtttcagctcaacaaagaaaaggaagagctggacgtgtt
cagcctggagaatgttatcatctctatccaagatgtgtatatgatgcttttgcagattgt
caattaccagaaattttaaggaccccgctgcagtctctttgtttacaaattaaaagtctg
aaactgggtagtatttctgagttcctgtcaagggcattgcagtcacctgagtatctagcg
gttcaaaatgctattgaatatttaaagatcattggggctttggatgagaatgaaaatttg
actgttttaggacgctacttaacaatgcttccaatggagccaaaacttggtaaaatgctt
atacttggtgctatattgaattgcctggacccaatgttaagtgttgtcgctgctctaagt
gtccgagatcctttcttagccccaatggacaagaaggaattagcagaagctgcaaaagct
caattttcacgtgattatagtgatcacctcgctcttgttcgggcatttgaagggtggaaa
gttgccgatagagatcttgctggatacaaatattgctggaagaatttcctgtctgcacag
tccatgaaagctattgattctcttcgcaaggaattctactctttgctaaaggatattggc
cttgtcgatagcaatccagtcaattacaatacatggagctatgatgagcaccttcttcga
gcaattatttgctatggcttgtatcctggaatctgctctgttgtgcacaatgaaaaatcc
ttctcccttaaaacgatggaagatgggcaggtgcttttgtactctaattcggttaatgcg
cgtgactcaaggataccatatccatggcttgttttcaaagaaaagatcaaagttaactct
gtcttcctgcgggattcaacagctgtgtctgattcagtgctgctactatttggtggaggc
atctcaaaaggagatatggacggtcacctaaaaatgctgggtggatgcttggagttctat
atggagccagctacagcagaactgtaccagagtttgaagagagagcttgatgaatttatt
cagacaaagctcctttatccgaagatggatatacattcctgccatgaacttttatctgca
atacggctgctgatctctgaagaacagtgcggtggtagatttgttttcaaccgccagata
gtacaaccctccaagccatctattgtagcagaagctccagccttcatacctaggtcagaa
agtggtcctgggggtgataattcgaagagtcagctacaaacattgctgactcgagcatgc
cgtgcagcacctgtatatgagacgaagtggctaaagaacaaccagttccaatcaactgta
gaattcaatggcatgcagataatggggcagccgttcaataacaagaagcaagcagaaaaa
gatgcagcagctgaggcactgcaatggattttgggacggaatcaggccggccatgactat
gttgaccacgtgtcaatgttgctgaaaaagagcaagaaggaccacaagtag
DBGET
integrated database retrieval system
