KEGG   Olea europaea var. sylvestris (wild olive): 111384103
Entry
111384103         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
oeu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111384103
  09124 Replication and repair
   03420 Nucleotide excision repair
    111384103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111384103
   03400 DNA repair and recombination proteins [BR:oeu03400]
    111384103
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111384103
DNA repair and recombination proteins [BR:oeu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111384103
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_4 Ogr_Delta Zn_ribbon_RPAB4 Rpr2
Other DBs
NCBI-GeneID: 111384103
NCBI-ProteinID: XP_022864106
LinkDB
Position
Unknown
AA seq 125 aa
MSTMKFCRECNNILYPREDKEQKILLYACRNCDHQKNGSYTEGRSLRPWAPCFWNGNEIH
HSAGERTQVLQDVAADPTLPRTKAVRCSNCGHGEAVFFQATARGEEGMTLFFVCCNPNCG
HRWRD
NT seq 378 nt   +upstreamnt  +downstreamnt
atgagtaccatgaagttttgtcgggaatgtaacaacatattgtacccgagggaagacaag
gaacagaaaatcctcctctatgcgtgtcgcaattgtgatcatcagaaaaatggttcgtac
acggaaggtagatctttgaggccttgggcaccatgcttttggaacggaaatgagatacac
cattctgctggggagcgcacccaggtcttgcaggacgtagctgcagatcctactcttccc
cgtacaaaagcagttcgttgttccaattgtggtcatggagaagctgttttctttcaggca
acggctaggggagaagaaggcatgactctgttcttcgtttgctgcaacccaaactgtggt
caccgctggagggattga

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