Olea europaea var. sylvestris (wild olive): 111384122
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Entry
111384122 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111384122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111384122
03036 Chromosome and associated proteins [BR:
oeu03036
]
111384122
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111384122
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111384122
mRNA degradation factors
5'-3' decay
Decapping complex
111384122
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111384122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Cas3-like_C_2
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
111384122
NCBI-ProteinID:
XP_022864127
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MHTFAAVILVPTRELALQTSQVCKELGKHLEIQVMVTTGGTSLKDDIMRLYQPVHLLVGT
PGRILDLAKRGICILRDCSILVMDEADKLLSPEFQPSIEQLIRFLPTNRQILMFSATFPV
TVKDFKDRYLRKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCN
SVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQA
VNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPP
HIDQAIYCR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcacacctttgcagctgttattcttgtcccaacgcgagaattggccctccagacatca
caagtttgtaaagaacttgggaagcacttagaaattcaagtcatggttactactggtgga
actagcttaaaagatgacataatgcgtttgtatcaaccagtccatttacttgttggaact
cctggaagaatccttgatcttgcaaaaaggggtatttgcattttgagagattgctccata
cttgttatggatgaggctgataagctcttgtcgccagagtttcaaccttctatcgagcag
ttaattcgctttttgcccacaaatcgtcagatcttaatgttttctgctacctttcctgtc
accgtaaaagatttcaaagatagatatctgcggaagccgtatatcatcaaccttatggat
gagcttactctcaagggtataacacagtattatgcttttgttgaagaaagacagaaagtg
cactgcctgaacacactcttttcaaagcttcaaataaatcaatctattattttctgcaat
tctgtgaatcgagtggagcttcttgccaagaaaattacagagcttgggtattcttgcttc
tacattcatgctaagatgcttcaagatcatcgcaacagagtgtttcatgacttccgcaat
ggtgcatgcaggaatctcgtatgtactgatctatttacaagagggatagatattcaagca
gtcaatgttgtgatcaattttgattttcctaagaactcagaaacatatttacacagggtt
ggtcgatctgggaggtttggacaccttgggttagccgtgaacctgataacctatgaggat
cgctttaatttgtataggattgaacaagaacttgggacagagatcaagcagatccctcca
catatagaccaggctatatactgccggtga
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