Olea europaea var. sylvestris (wild olive): 111388560
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Entry
111388560 CDS
T05244
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X1
KO
K14485
transport inhibitor response 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111388560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111388560
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111388560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
LRR_14
Motif
Other DBs
NCBI-GeneID:
111388560
NCBI-ProteinID:
XP_022869082
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MAYSFPEEVLEYVFAFLSSHKDRNAVSLVCKSWYEIERWCRRRIFIGNCYAVSPQIVIRR
FPEVRAVKIKGKPHFADFNLVPEGWGAYVYPWISAMVRSYPWLEEIKLKRMVVTDESLEL
LSKSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRECEVEDLSGHWLSHFPDNFT
SLVSLNMSCLGSEVSFSALERLVSRCPNLRTLRLNRAVPVEKLPNLLRRAPQLVEFGTGA
YSAENQTDIFSNLVEAFSGCKHLKSLSGFWDVDPAYLPAMYYACTGITSLNLSNATVQSP
DLVELIIQCPNLKCLWRERELIEDMTTQVLDYIEDAGLKALPSYCKDLQELRVFPSDPYG
AEPNVSLTEQGLVTVSAGCPKLQSVLYFCRQMSNAALITIARNRPNLIRFRLCIIDPQAP
DYLTLEPLDTGFGAIVEHCKELLRLSMSGLLTDRVFEYIGTHAKKLEMLSIAFAGDSDLG
LHNVLSGCESLRKLEIMDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPK
LNVEVMDERGHPDSRPETCPVEKLYIYRTVAGPRVDKPNFVWTMDEDAVLRLS
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaggtgctggagtacgtgtttgcgttcttgagctcccac
aaggaccggaacgcggtttcactggtgtgcaaatcgtggtatgagattgagaggtggtgc
cggaggaggatttttatcgggaactgttatgcggtgagtccacaaatcgttatccgccgg
tttccggaggtgagggcagtgaagatcaaggggaaaccgcattttgcggatttcaacttg
gtgccggagggttggggtgcgtatgtgtatccatggatctcagccatggttagatcttac
ccgtggcttgaagaaatcaagctcaagcgcatggtggttacggatgagagcttggagctt
ctctccaagtcgttcaaaaattttaaagttttggtgctctcgtcgtgtgaggggttcact
actgatggtcttgcctccattgcagccaattgcaggaaccttagagaactagatttgagg
gagtgtgaagtggaggacttgagtgggcattggcttagccatttcccagacaacttcaca
tcactggtgtcgcttaacatgtcttgtttaggttctgaggtgagcttttctgctctggag
cgtcttgtttcacgttgtcctaacctgagaactcttcgtctgaatcgtgcggtgcctgtt
gagaagctcccaaacctacttcgccgtgcaccccaattggttgagtttggtacaggtgcc
tattcggctgaaaatcaaacggatatcttctcaaacttggtagaagctttttcaggctgc
aagcatctcaaaagcttgtcggggttttgggatgtggatccagcttaccttccagcaatg
tattatgcgtgcaccggaatcacttcattgaacttgagcaatgctactgttcaaagtcca
gatcttgttgagctcattatccagtgtcccaatttgaagtgtctatggagagagagagaa
ctcattgaagacatgaccactcaggtgctggattacatcgaggatgctggtcttaaggca
cttccctcatattgcaaggatctgcaggaacttagggtgtttccttcagatccttatggt
gcagaaccaaatgtgtctttgacggaacaggggcttgtcacagtttcagcaggttgcccc
aagcttcagtcggtgctatacttctgccgtcagatgtcaaatgcagcgttgattactatt
gcaaggaatcgtcctaaccttattcgcttccgtttatgtattatcgaccctcaagctcct
gattacctaacccttgaacctcttgatactggctttggagcaattgtagagcactgtaaa
gagctgctgcgcctttctatgtctggtctcctcactgatcgagtttttgaatacattggg
actcatgctaagaaactagagatgctttctatagctttcgctggggatagtgacttgggc
ctccataacgtgttgtctgggtgtgaaagcctccgaaaattggagatcatggactgtcca
tttggggacaaggctctcttggccaatgctgcaaagctggagacaatgcgatccctttgg
atgtcatcttgctccgtaagttatggagcatgtaagcttctaggtcagaagatgcccaag
ctcaatgttgaagttatggacgagagaggacaccctgattcaaggccagaaacctgtcct
gttgaaaaactctatatatacaggacagttgcagggccaagagttgataaacccaatttt
gtatggacaatggatgaagatgcagtgttgaggctttcttaa
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