KEGG   Olea europaea var. sylvestris (wild olive): 111388623
Entry
111388623         CDS       T05244                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111388623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oeu03041]
    111388623
   03036 Chromosome and associated proteins [BR:oeu03036]
    111388623
Spliceosome [BR:oeu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111388623
 Complex B
    111388623
 Complex C
   U2 SnRNP specific factors
    111388623
Chromosome and associated proteins [BR:oeu03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    111388623
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_2 HEAT_ECM29 Htt_N-HEAT_1 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N UME MMS22L_C
Other DBs
NCBI-GeneID: 111388623
NCBI-ProteinID: XP_022869144
LinkDB
Position
Unknown
AA seq 1007 aa
DKDKDKEKEKEAEKPKKRNRWDMSQDESGGVKKAKVGSDWDLPDSTPGIGRWDATPTPGR
IGDATPSISRKNRWDETPTPGRLNDSDATPAAGGATPGATPAGMTWDATPKLAGLATPTP
KRQRSRWDETPATVGSATPMGGATPAAAYTPGVTPVGAMDIATPTPNAIMRNAAMTPEQY
NLMRWEKDIEERNRPLTDEELDAMFPQEGYKILEPPPSYVPIRTPARKLLATPTPMSTPL
YSIPEENRGQQFDVPKELPGGLPFMKPEDYQYFGSLLNEEDEEELSPEEQKERKIMKLLL
KVKNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYK
LDELVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDE
YVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPH
LRSLVEIIEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKV
LAAFLKAIGFIIPLMDAIYASYYTKEVMIILIREFQSPDEEMKKIVLKVVKQCVSTEGVE
ADYIRNDILPEFFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESE
PYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSL
GQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMRQCGEEQLMGHLGVVLYEY
LGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGR
IADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNL
KVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEM
GKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDAL
NT seq 3021 nt   +upstreamnt  +downstreamnt
gataaggataaggataaggagaaagagaaagaggcagagaagccaaagaagaggaatagg
tgggatatgtcgcaggatgagagtggtggtgtgaagaaagcgaaggtagggtcagattgg
gacttgcctgactctaccccaggaattgggaggtgggatgcaactccaacgcctggtagg
attggagatgcaacaccctcgatttcaagaaaaaataggtgggatgagacccctactcca
ggacgattgaatgattcagatgcaaccccagctgctggtggagctactccaggagcaacc
cctgcaggaatgacttgggatgccacaccgaagctggcgggtttagcaactccaacaccc
aaaaggcagaggtcgaggtgggatgagactccagctactgtgggcagtgcgacaccaatg
ggaggtgctacccctgctgctgcctataccccaggcgttactcccgttggcgctatggat
attgctactccaaccccgaatgctattatgcgtaatgctgcaatgactcctgagcagtac
aatttgatgaggtgggagaaggatatcgaggaaagaaataggccattgactgatgaggag
cttgatgcaatgtttccacaggaggggtataagattttggaaccccctccttcatatgtt
cctatcagaacacctgccaggaagcttcttgctacaccgacaccgatgtcaactccactg
tattctattccagaagaaaatcggggtcagcaatttgatgtgccaaaagagttgcctggt
ggtttgccatttatgaaacctgaggattatcaatactttggttcacttctgaatgaagag
gacgaagaggagttgtctcctgaggagcaaaaagagcggaagatcatgaagctcttgcta
aaggttaaaaatggtacgcctccacagaggaaaactgctttgagacagctcacggataag
gcaagagaatttggtgctggtccgctcttcaaccgtattctgccactgcttatgcagccc
acactggaagaccaggagagacacttgttggtgaaagttattgacagggtgctctataag
ttagatgagttggttcggccttatgtacacaaaattttggtggttatagagcctctgttg
attgatgaagattattatgctcgtgtggaaggtagagaaattatctccaatctcagcaag
gcagctggtttggccactatgattgctgcaatgcgtccagacattgataacattgatgag
tatgtgagaaacaccactgctagagcttttagtgttgttgcctctgcacttggtattcct
gcattgcttccattcttgaaagctgtttgtcaaagcaaaaaatcttggcaagctcgtcac
acaggtatcaagattgtgcagcagattgcaatattaattggatgtgctgttcttccacac
ttgaggtcattggttgagattattgaacatggtcttaatgatgaaaatcaaaaggtcaga
acaatcacagcgctgtcattggctgcccttgctgaggcatctgccccatatggcattgaa
agctttgactcagtattgaaacctctgtggaagggtataaggtcacaccgtgggaaagtt
ttggcagccttcctgaaggctattggatttatcataccacttatggatgccatatatgcc
agctactataccaaggaagttatgattattctgattcgcgagttccagtcaccagatgaa
gaaatgaagaaaattgtgctgaaagtggtaaagcagtgtgtgagtacagaaggtgtggag
gcagattatatccgaaatgacattcttccagagttcttccgtaatttctgggtgaggagg
atggctttggataggagaaattacaggcagcttgttgagactacagtggagatagcaaac
aaagttggtgttgctgatattgtaggaagaatcgtggaagacttaaaagatgaaagtgag
ccatataggaggatggtcatggagacaattgagaaagtggttgcaaacttgggggcatct
gatattgatgctcgcttggaagagctactaatagatggaattctctatgcattccaagag
cagacaagtgatgatgctaatgttatgctaaatgggtttggtgcagttgtgaattccctt
ggacagagagtgaagccataccttccccagatatgtggtaccataaaatggcggctcaac
aataagagtgcaaaagtgaggcagcaagccgcagatctaatatctagaattgctgtggtt
atgagacaatgtggagaagaacagttgatgggccatcttggtgttgtattgtatgagtat
ttgggagaggagtatcctgaagttctgggctcaatattgggtgctctcaaagccatagtc
aatgttattggtatgaccaaaatgactcctccaatcaaggatttgcttcctcggctgact
ccaattttgaagaatcgccatgagaaagtccaggagaattgtatcgatcttgttggaaga
attgctgaccgtggggctgagtttgtacctgcaagggagtggatgagaatatgtttcgag
cttcttgagatgcttaaagcacataaaaagggtattcgtagagcaactgtgaatactttt
ggttatatcgcaaaagctattggaccacaagacgtccttgcaactttgttaaataacctc
aaggtgcaggaacggcagaaccgtgtgtgcacgactgtggctattgcaatagttgccgaa
acctgttcgccttttacagttttgcctgcattgatgaatgagtaccgggtgccagagctt
aatgttcagaatggtgttctgaagtcgctctccttcctgttcgagtacataggcgagatg
gggaaagactacatatatgctgtgactccattactcgaggatgctctcatggaccgtgat
ttggttcacaggcaaactgcagcttcagcagtcaagcatatggccttgggagttgctggt
ctaggatgtgaagatgctttg

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